|
Name : NH44784_009641 (NH44784_009641) Accession : YP_008028065.1 Strain : Achromobacter xylosoxidans NH44784-1996 Genome accession: NC_021285 Putative virulence/resistance : Unknown Product : Type IV secretory pathway, VirD4 components Function : - COG functional category : - COG ID : - EC number : - Position : 1020902 - 1022968 bp Length : 2067 bp Strand : - Note : - DNA sequence : ATGGGCATCGGCAGCGCCTTGGCGTTCGGCGCCTACGGCGCGATCCGCTACCGCGATGCCCGCATCATCCTGCGCTACCG GCGCAACATCCGCCGTCTGCCGCGTTACGTGATGACCAGCAAGGACGTGCCGGTCAGCCAGCAGCGCCTATTCGTGGGGC GCGGCTTTCTCTGGGAGCAGAAGCACACGCATCGGCTGATGCAGACGTACCGGCCCGAGTTCCGCCGCTACGTCGAGCCG ACGCCGGCCTACCGGCTGACCAGGCGCCTGGAGGAACGGCTGGAGTTCGCGCCATTGCCGCTCTCGCGCCTGCCGAAGCT CACCGGCTGGGACGCGCCTTTCAACCCCGTGCGCCCGTTGCCGCCTGTCGGCGGCCTGCCAAGGCTGCACGGCATCGAGC CCGACGAAGTGGACGTCAGCCTGCCGCTGGGCGAGCGCGTCGGGCACTCGCTGGTGCTGGGCACCACGCGGGTGGGCAAG ACGCGCCTGGCCGAGTTGTTCGTCACGCAGGACATCCGTCGCAGGAATGCTGCCGGCGAGCATGAGGTCGTCATCGTCAT CGACCCCAAGGGGGATGCCGATCTCTTGAAACGGATGTACGTCGAAGCCCAGCGCGCTGGCCGCGAAGGCGAGTTCTACA TCTTCCACTTGGGCTGGCCGGAAATCAGCGCCCGCTACAACGCCGTGGGCCGCTTCGGTCGGATCTCGGAAGTGGCGACA CGCATCGCGGGGCAGCTCTCCGGCGAAGGCAACAGCGCGGCGTTCCGCGAGTTCGCATGGCGCTTCGTGAACATCATCGC CCGCGCCCTGGTGGAACTGGGGCAGCGCCCGGACTACATGCTGATCCAGCGCCACGTCATCAACATCGACGCGCTGTTCA TTGAGTACGCCCAGCACTACTTTGCCAAGACGGAGCCCAAGGCCTGGGAGGTGATCGTCCAGATCGAGGCCAAGCTCAAC GAGAAGAACATCCCAAGGAACATGATCGGGCGCGAGAAGCGTGTGGTGGCGCTGGAGCAATACCTCTCCCAGGCGCGCAA CTACGACCCTGTGCTCGATGGCCTGCGCTCGGCGGTGCGCTACGACAAGACCTACTTCGACAAGATCGTTGCATCGCTGC TGCCGCTGCTGGAAAAGCTCACGAGCGGCAAGATCGCCCAGCTCCTGGCGCCGAACTACTCCGACCTGGCCGACCCGCGC CCGATCTTCGACTGGATGCAGGTCATCCGAAAGCGGGCCATCGTCTATGTGGGTCTGGATGCGTTGTCTGACGCCGAGGT CGCCGCAGCGGTCGGCAATTCGATGTTCTCTGACCTGGTTTCGGTGGCCGGACACATCTACAAGCACGGAATCGACGATG GCCTGCCCGGCGCAGTGGCTGGCGCTCGCGTGCCGATCAACGTGCACGCGGACGAATTCAATGAACTGATGGGCGATGAA TTCATCCCGCTCATCAACAAGGGCGGCGGTGCCGGCCTGCAAGTCACGGCGTACACGCAGACGCTCTCGGACATCGAGGC CCGCATCGGAAATCGCGCGAAGGCCGGCCAAGTGATCGGGAATTTCAACAATTTATTCATGTTGCGCGTGCGCGAGACGG CCACCGCGGAACTGCTGACGAGGCAGTTGCCGAAGGTCGAGGTCTATACAACCACCATCGTCTCGGGCGCGACGGACAGC TCAGACATCCGCGGCGCGACGGATTTCACGTCGAACACCCAGGACCGCATCAGCATGGCCAGCGTGCCGATGATCGAGCC GTCACACGTCGTCGGCCTGCCCAAGGGCCAGTGCTTCGCGCTGCTGCAGGGCGGCCAGCTCTGGAAGGTGCGTATGCCGC TGCCGGCGCCGGACCCGGATGAAGTGATGCCGGCGGACCTGCAGCAACTGGCCGGGTACATGCGCCAGAGCTACAGCGAG GCCACGCAGTGGTGGGAGTTCACCAGCTCGTCGGCCTTGCAGGATGCGGCCTTGCCCGACGACCTGCTGGACGATGCCGC TGCGGCCGAGCCCGGCGCGGTGGCCACCGGCGCCGACGATGGCGCGGGCAACGAGGCCGTGCCATGA Protein sequence : MGIGSALAFGAYGAIRYRDARIILRYRRNIRRLPRYVMTSKDVPVSQQRLFVGRGFLWEQKHTHRLMQTYRPEFRRYVEP TPAYRLTRRLEERLEFAPLPLSRLPKLTGWDAPFNPVRPLPPVGGLPRLHGIEPDEVDVSLPLGERVGHSLVLGTTRVGK TRLAELFVTQDIRRRNAAGEHEVVIVIDPKGDADLLKRMYVEAQRAGREGEFYIFHLGWPEISARYNAVGRFGRISEVAT RIAGQLSGEGNSAAFREFAWRFVNIIARALVELGQRPDYMLIQRHVINIDALFIEYAQHYFAKTEPKAWEVIVQIEAKLN EKNIPRNMIGREKRVVALEQYLSQARNYDPVLDGLRSAVRYDKTYFDKIVASLLPLLEKLTSGKIAQLLAPNYSDLADPR PIFDWMQVIRKRAIVYVGLDALSDAEVAAAVGNSMFSDLVSVAGHIYKHGIDDGLPGAVAGARVPINVHADEFNELMGDE FIPLINKGGGAGLQVTAYTQTLSDIEARIGNRAKAGQVIGNFNNLFMLRVRETATAELLTRQLPKVEVYTTTIVSGATDS SDIRGATDFTSNTQDRISMASVPMIEPSHVVGLPKGQCFALLQGGQLWKVRMPLPAPDPDEVMPADLQQLAGYMRQSYSE ATQWWEFTSSSALQDAALPDDLLDDAAAAEPGAVATGADDGAGNEAVP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C65 | AAN62159.1 | conserved hypothetical protein | Not tested | PAGI-2(C) | Protein | 0.0 | 99 |
| ORF SG68 | AAN62290.1 | conserved hypothetical protein | Not tested | PAGI-3(SG) | Protein | 0.0 | 89 |
| traG | CAI36113.1 | putative TraG family conjugative protein | Not tested | PPHGI-1 | Protein | 0.0 | 76 |
| EXA47 | ABD94656.1 | TraG/TraD family protein | Not tested | ExoU island A | Protein | 0.0 | 71 |
| unnamed | ABR13375.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 0.0 | 71 |
| RL047 | AAP84173.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 0.0 | 70 |
| YpsIP31758_3718 | YP_001402672.1 | hypothetical protein | Not tested | YAPI | Protein | 1e-176 | 64 |
| YE3493 | YP_001007651.1 | TraG-family protein | Not tested | YAPI | Protein | 9e-178 | 64 |
| api27 | CAF28501.1 | hypothetical protein | Not tested | YAPI | Protein | 2e-177 | 64 |
| STY4562 | NP_458648.1 | hypothetical protein | Not tested | SPI-7 | Protein | 3e-175 | 63 |
| t4260 | NP_807858.1 | hypothetical protein | Not tested | SPI-7 | Protein | 3e-175 | 63 |
| PMI2588 | YP_002152307.1 | plasmid transfer protein | Not tested | Not named | Protein | 1e-178 | 63 |
| Pmu_03190 | YP_005176218.1 | conjugal transfer protein TraD | Not tested | ICEPmu1 | Protein | 9e-176 | 62 |
| traD | AAW83057.1 | TraD | Not tested | GGI | Protein | 9e-125 | 50 |
