Gene Information

Name : NH44784_009211 (NH44784_009211)
Accession : YP_008028022.1
Strain : Achromobacter xylosoxidans NH44784-1996
Genome accession: NC_021285
Putative virulence/resistance : Virulence
Product : DNA-binding heavy metal response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 982689 - 983381 bp
Length : 693 bp
Strand : +
Note : -

DNA sequence : 
ATGAAACTGCTGGTCGTTGAAGACGAGAACAAGACGGCGGATTACGTCCGCCAAGGTCTCATGGAGGCGGGATTCGTCGT
GGATCTGGCGCGCAACGGATTGGACGGACACCACCTGGCCATGGGCGAGACATACGATCTGGTGGTCTTGGATGTCATGC
TGCCGGATGTCGATGGCTGGCGCATCGTGCGTGCCCTTCGAGATGCCGGTAAACAGGTCCCTGTGCTCTTTCTGACGGCG
CGTGGCGGTGTAGACGACCGTGTCAAGGGATTGGAACTGGGAGCGGACGACTACCTCGTCAAGCCATTCGCGTTCTCTGA
GTTGCTGGCGCGGGTGCGGACGCTGCTGCGACGCGGAAGCGCTCCGAGCCAGCCTGATCGCATCCAGGTTGCCGATTTGG
TGCTGGACTTGGCGCGCCGGCGCGCAACGCGCGCTGGCCAACGCATCAATCTCACCAGCAAGGAGTTCGCGTTGCTTGAG
CTCCTGGCCCGTCGCCAGGGGGAGGTCCTTCCACGGTCTCTGATCGCGTCGCAGGTATGGGACATGAATTTCGACAGCGA
CAGCAACGTCATCGATGTAGCCATCCGCCGTCTACGCGCGAAGATAGACGATGCGTTCAATCCGAAGCTCATCCACACCG
TGCGTGGAATGGGATACACGCTCGATGCGCCCGATGATGCCCCTGCGCCATAA

Protein sequence : 
MKLLVVEDENKTADYVRQGLMEAGFVVDLARNGLDGHHLAMGETYDLVVLDVMLPDVDGWRIVRALRDAGKQVPVLFLTA
RGGVDDRVKGLELGADDYLVKPFAFSELLARVRTLLRRGSAPSQPDRIQVADLVLDLARRRATRAGQRINLTSKEFALLE
LLARRQGEVLPRSLIASQVWDMNFDSDSNVIDVAIRRLRAKIDDAFNPKLIHTVRGMGYTLDAPDDAPAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-54 57
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-53 56

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NH44784_009211 YP_008028022.1 DNA-binding heavy metal response regulator BAC0083 Protein 9e-69 71
NH44784_009211 YP_008028022.1 DNA-binding heavy metal response regulator BAC0111 Protein 6e-72 70
NH44784_009211 YP_008028022.1 DNA-binding heavy metal response regulator BAC0638 Protein 2e-60 67
NH44784_009211 YP_008028022.1 DNA-binding heavy metal response regulator BAC0347 Protein 1e-62 65
NH44784_009211 YP_008028022.1 DNA-binding heavy metal response regulator BAC0197 Protein 8e-61 63
NH44784_009211 YP_008028022.1 DNA-binding heavy metal response regulator BAC0308 Protein 1e-60 61
NH44784_009211 YP_008028022.1 DNA-binding heavy metal response regulator BAC0125 Protein 3e-59 61
NH44784_009211 YP_008028022.1 DNA-binding heavy metal response regulator NC_002516.2.879194.p Protein 3e-27 43
NH44784_009211 YP_008028022.1 DNA-binding heavy metal response regulator BAC0487 Protein 9e-26 41
NH44784_009211 YP_008028022.1 DNA-binding heavy metal response regulator NC_010079.5776364.p0 Protein 8e-30 41
NH44784_009211 YP_008028022.1 DNA-binding heavy metal response regulator NC_002952.2859858.p0 Protein 8e-30 41
NH44784_009211 YP_008028022.1 DNA-binding heavy metal response regulator NC_007622.3794948.p0 Protein 8e-30 41
NH44784_009211 YP_008028022.1 DNA-binding heavy metal response regulator NC_003923.1003417.p0 Protein 8e-30 41
NH44784_009211 YP_008028022.1 DNA-binding heavy metal response regulator NC_013450.8614146.p0 Protein 8e-30 41
NH44784_009211 YP_008028022.1 DNA-binding heavy metal response regulator NC_002951.3238224.p0 Protein 8e-30 41
NH44784_009211 YP_008028022.1 DNA-binding heavy metal response regulator NC_007793.3914065.p0 Protein 8e-30 41
NH44784_009211 YP_008028022.1 DNA-binding heavy metal response regulator NC_002758.1121390.p0 Protein 8e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NH44784_009211 YP_008028022.1 DNA-binding heavy metal response regulator VFG0596 Protein 6e-55 57
NH44784_009211 YP_008028022.1 DNA-binding heavy metal response regulator VFG1390 Protein 4e-38 44