Gene Information

Name : NH44784_008881 (NH44784_008881)
Accession : YP_008027990.1
Strain : Achromobacter xylosoxidans NH44784-1996
Genome accession: NC_021285
Putative virulence/resistance : Unknown
Product : DNA topoisomerase III
Function : -
COG functional category : -
COG ID : -
EC number : 5.99.1.2
Position : 948972 - 950984 bp
Length : 2013 bp
Strand : -
Note : -

DNA sequence :
ATGCGGCTGTTCTTGTGCGAGAAGCCCTCCCAGGGCAAGGACATCGGCCGGATTCTCGGCGCGACGCAGCGCGGTGAAGG
CTGTCTCAGCGGCTCCGGCGTCATCGTCACCTGGTGCATCGGCCATCTCGTAGAAGCGGCAGCTCCCGAGGTCTATGACG
CGGCGCTCAAGCGCTGGTCGCTGGAGCAGTTGCCCATCATTCCTCAGCAATGGCGGGTCGAGGTCAAACCGAAGACCGCC
ACGCAATTCAAGGTCGTCAAGGCCCTTCTGGCGAAGGCGACCCATCTGGTCATCGCCACCGATGCCGACCGCGAGGGCGA
GCTGATCGCCCGCGAGATCATCGACCTGTGCGGCTACCGCGGCCCCATCGAGCGGCTATGGCTGTCGGCACTCAACGATG
CGTCGATCCGCACCGCGCTCGGTAAGTTGCGGCCGTCTTCCGACACGCTGCCGATGTACTACTCGGCACAGGCGCGCTCG
CGCGCCGACTGGCTCGTGGGCATGAACCTCAGCCGGTTGTTCACCGTGCTCGGGCGGCAAGCGGGCTACGACGGCGTGCT
GTCTGTCGGCCGCGTTCAGACGCCGACCCTGAAGCTCGTCGTGGACCGCGACCGCGAGATCGCGGCCTTCAAGTCGGTGC
CGTTCTGGGCCATCGACGTGTCCCTGTCCGCAGGTGGACAGGCTTTCAGCGCGCAGTGGGTTCCGCCCGACGGCTGCATC
GACGACGCAGGCCGCTGCCTGCAGCAGCCGGTCGCCCAGCAGGCCGCGCAGCAGATCCGCGCTGCGGGCAGCGCCCAGGT
GGTATCGGTCGAGACAAAGCGCGTGCGCGAAGGCCCACCGCTGCTGTTCGACCTGGGAACACTTCAGGAGGTTTGTTCCA
AGCAGCTTGGACTGGATGTGCAGGAGACCCTGGAGATCGCCCAGGCCCTGTACGAGACGCACAAGGCCACGACGTACCCA
CGCTCCGATTCGGGCTACCTGCCCGAAAGCATGTTCGCAGAAGTACCGACTGTCCTAGACAGCTTGCTCAAGACCGATCC
CTCGCTGCGCCCCATCATGGGCCAGCTCGATCGCTCGCAGCGCTCACGCGCCTGGAACGACGGCAAGGTGACGGCGCACC
ACGGCATCATCCCGACGCTTGAACCCGCGAACCTCTCTGTGATGAGCGAGAAGGAGCTGGCGGTGTACCGCCTGATCCGC
GCGCATTACCTCGCGCAGTTCCTCCCTCACCACGAGTTCGACCGCACTGTCGCCGAGCTGTCCTGCGGCCAGCAGAAGCT
GGCGGCCACCGGAAAGCAGGTGGTCGCCCAGGGTTGGCGTCTGGTGCTGGCCGAGCCGCAAGCGGACGAGGATGGCGACG
ACGCCGCGCGCAGCCAGGTACTCCCCGCGCTGCGCGAGGGCATGGCGTGCCAGGTGGCCGAGGCCGAAATCAAGGCGCTC
AAGACGATGCCGCCCAAGCCGTACACGCAAGGCGAACTGGTCAAGTCCATGAAGGGGGTCGCCAAGCTGGTGACGGACCC
ACGCCTGAAGCAGAAGCTCAAGGAAACGGTCGGCATCGGCACCGAGGCGACACGGGCGAACATCATCAGTGGGTTGATCG
CCCGCGGCTACCTCGTGAAGAAAGGACGCTCGATTCGCGCATCGGATGCAGCATTCACGTTGATCGACGCCGTGCCCACG
GCGATTGCCGACCCCGGAACCACCGCCGTGTGGGAGCAGGCGCTCGACATGATCGAGGCCGGACAGCTCACCCTGGATGT
GTTCATCGGCAAGCAGGCCGCATGGATTTCGCAACTGATCGCGCAGTACGGCAGCACTTCGCTGTCCATCAAGGTTCCCC
AGGGACCCGCTTGCCCGCAGTGCGGCGCAACGACGCGCCAGCGCACCGGCAAAACCGGCCCCTTTTGGTCGTGCAGTCGC
TACCCCGACTGCAAAGGCACGCTGCCGGTCGATTCCGGCACGTCCAAGCGCGGTGCCTCGCGCCCGCGCACTAGCGGCCG
CAAGGGCTCCTGA

Protein sequence :
MRLFLCEKPSQGKDIGRILGATQRGEGCLSGSGVIVTWCIGHLVEAAAPEVYDAALKRWSLEQLPIIPQQWRVEVKPKTA
TQFKVVKALLAKATHLVIATDADREGELIAREIIDLCGYRGPIERLWLSALNDASIRTALGKLRPSSDTLPMYYSAQARS
RADWLVGMNLSRLFTVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIAAFKSVPFWAIDVSLSAGGQAFSAQWVPPDGCI
DDAGRCLQQPVAQQAAQQIRAAGSAQVVSVETKRVREGPPLLFDLGTLQEVCSKQLGLDVQETLEIAQALYETHKATTYP
RSDSGYLPESMFAEVPTVLDSLLKTDPSLRPIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPANLSVMSEKELAVYRLIR
AHYLAQFLPHHEFDRTVAELSCGQQKLAATGKQVVAQGWRLVLAEPQADEDGDDAARSQVLPALREGMACQVAEAEIKAL
KTMPPKPYTQGELVKSMKGVAKLVTDPRLKQKLKETVGIGTEATRANIISGLIARGYLVKKGRSIRASDAAFTLIDAVPT
AIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAAWISQLIAQYGSTSLSIKVPQGPACPQCGATTRQRTGKTGPFWSCSR
YPDCKGTLPVDSGTSKRGASRPRTSGRKGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
topB AAN62194.1 putative DNA topoisomerase III Not tested PAGI-2(C) Protein 0.0 90
topB AAN62317.1 putative DNA topoisomerase III Not tested PAGI-3(SG) Protein 0.0 76
pph56 CAI36097.1 Topoisomerase IA Not tested PPHGI-1 Protein 0.0 63
topB1 YP_005176228.1 DNA topoisomerase III Not tested ICEPmu1 Protein 4e-169 51
topB AAF14809.1 topoisomerase B Not tested SPI-7 Protein 2e-166 50
topB NP_458624.1 topoisomerase B Not tested SPI-7 Protein 3e-166 50
topB NP_807836.1 DNA topoisomerase III Not tested SPI-7 Protein 3e-166 50
PMI2630 YP_002152332.1 DNA topoisomerase III Not tested Not named Protein 2e-165 49
topB AAW83109.1 TopB Not tested GGI Protein 1e-119 41