Gene Information

Name : NH44784_008681 (NH44784_008681)
Accession : YP_008027970.1
Strain : Achromobacter xylosoxidans NH44784-1996
Genome accession: NC_021285
Putative virulence/resistance : Unknown
Product : Superfamily II DNA/RNA helicases, SNF2 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 933914 - 936193 bp
Length : 2280 bp
Strand : -
Note : -

DNA sequence :
ATGTCCCTCGATCTCGAAACCACTGCCGCTGAAGCGGCGCCCGTACAGGGCGAACTGCTCGATGCGGAATCTTCCCCTCT
GACCCTGAGCCTTCAGGATTTCGTCGGCGAGTTCGGCGACGAACTGCTCGACGCCCTCAATAGCGCAAATCCGCCGGTCT
ATAACGGCCAGCCGCAGGCGCACCGGCAACTCGTCGTCGCCAGCCTCAAGCGCAAGCTGTTCCCGGCCCAGGCCGAAGTC
GTCCACGCCGCCGCCGAGCTGCTGATCGATCGTGGCGAACGCGCCGCGATCGTCAATGGCGAAATGGGCTGCGGCAAGAC
GACCGTCGGCATCGCCACGGCCGCTGTGCTCAACGCCGAAGGCTACCGCCGCACCCTGGTTCTTTCGCCGCCGCACCTTG
TTTACAAGTGGCGGCGCGAGATCCAGGAGACGGTGGCGGGCGCCAAGGTGTGGGTGCTCAACGGGCCGGACACGCTCGTC
AAGCTCATCAAGCTGCGCGAACAGTTGAACGTCCAGTCCACGGGCCAGGAGTTCTTTGTCCTGGGCCGCGTGCGGATGCG
GATGGGGTTCCATTGGAAGCCCGTCTCCACCCAGCGGCGTACCCGTCACGGCAACGTGGCGGCGTGCCCGGACTGCGGCA
CGGTCATCACCGACCTCGATGGGGAGCCGGTCAACCCGGTCGCGCTCCAAGCCGAGGAATACCGCAGGAAGTGCAGCCAT
TGCGCCGCGCCCCTGTGGACGCTGATCCGCCCGCGCAGCCTGTCCGGCAGCGACCAGTCCTCGACCGTGCTGAAAGCCCT
CAAGCGCATACCGACCATCGGGGAAGTCACCGCGCAGAAGCTGATGCAGAAGTTCGGCGACGGGTTCCTGGCGTCGATGC
TGGGCGACAACATTCATGAGTTCATCAACCTCATGGACAGCAACGGCGACCTGGTGTTTTCCGACCGTCAAGCCACGCGC
ATGGAGCGTGCGATGGCCAACATGGAGTTTGGGTTTGGCGAGGGCGGCTATCAGCCGTCCGAGTTCATCAAACGCTACCT
GCCGCAAGGCACGTTCGACTTGTGCATCGCAGACGAGGCGCATGAGTACAAGAACGGTGGCAGCGCCCAGGGCCAGGCCA
TGGGCGTGCTGGCGGCGAAGGCTCGCAAGACCTTGCTGCTGACCGGCACGCTGATGGGCGGCTATGGGGACGACCTGTTC
TACCTACTGTTCCGGGCACTGCCAGGACGGATGATCGAAGACGGCTACCGCCCGACCACGAGCGGGAGCATGACTTCGGC
CGCGATGGCGTTCATGCGCGATCACGGCGTCTTGAAGGACATCTATTCCGAGAGCACCGGCACGGCGCACAAGACGGCCA
AGGGCACCAAGGTATCGGTGCGCACGGTCAAGGCCCCGGGCTTCGGCCCCAAGGGCGTACTGCGCTGCATCCTGCCGTTC
ACGATCTTCCTCAAGCTCCGAGACATCGGTGGCAATGTCCTGCCGCCGTATGACGAAGAGTTCCGTGAAGTCGCGATGGA
TACGGCGCAAGCCGCTGCCTACCGCGATCTGGCGGGTCGGCTGACCGCGGAGCTGAAACAGGCTCTGGCGCGACGCGATA
CGACGCTGCTGGGTGTGGTGCTCAACGTGCTGCTGGCCTGGCCGGACTGCTGCTTCCGGTCGGAGACCGTGGTGCATCCG
CGCACGCGCAACACCTTGGCGTTCATCCCGGCTCAGTTCAACGAGTTCGAGGTGACGCCGAAAGAGCGCGAGCTGATCGA
CATTTGCAAGGAAGAGAAGGCGCATGGCCGCAAGGTCCTGGCCTACACGGTCTATACCGGCACGCGCGACACCACGTCGC
GCCTGAAGATGCTGCTGGAGCAGGAAGGTTTTCGGGTGGCGGTGCTGCGCGCAAGCGTGGACGCCAGCCGCCGCGAGGAC
TGGATCGCCGAGCAACTGGATCGTGGCATCGACGTGCTCATCACCAACCCCGAGCTGGTCAAGACGGGATTGGACCTGTT
GGACTTCCCGACGATCGTTTTCATGCAGTCGGGCTACAACGTGTACTCGCTCCAGCAGGCGGCACGCCGCTCCTGGCGCA
TCGGACAGAAACAGCCGGTGCGCGTGATCTACCTCGGCTACGCCGGTTCCTCGCAGATGACCTGCCTGGAACTGATGGCC
AAGAAGATCATGGTCTCGCAGTCCACATCGGGCGACGTGCCCGAATCGGGCCTGGATGTGCTCAACCAGGACGGTGATTC
CGTCGAGGTCGCACTGGCCCGGCAACTGGTCGCCGCCTGA

Protein sequence :
MSLDLETTAAEAAPVQGELLDAESSPLTLSLQDFVGEFGDELLDALNSANPPVYNGQPQAHRQLVVASLKRKLFPAQAEV
VHAAAELLIDRGERAAIVNGEMGCGKTTVGIATAAVLNAEGYRRTLVLSPPHLVYKWRREIQETVAGAKVWVLNGPDTLV
KLIKLREQLNVQSTGQEFFVLGRVRMRMGFHWKPVSTQRRTRHGNVAACPDCGTVITDLDGEPVNPVALQAEEYRRKCSH
CAAPLWTLIRPRSLSGSDQSSTVLKALKRIPTIGEVTAQKLMQKFGDGFLASMLGDNIHEFINLMDSNGDLVFSDRQATR
MERAMANMEFGFGEGGYQPSEFIKRYLPQGTFDLCIADEAHEYKNGGSAQGQAMGVLAAKARKTLLLTGTLMGGYGDDLF
YLLFRALPGRMIEDGYRPTTSGSMTSAAMAFMRDHGVLKDIYSESTGTAHKTAKGTKVSVRTVKAPGFGPKGVLRCILPF
TIFLKLRDIGGNVLPPYDEEFREVAMDTAQAAAYRDLAGRLTAELKQALARRDTTLLGVVLNVLLAWPDCCFRSETVVHP
RTRNTLAFIPAQFNEFEVTPKERELIDICKEEKAHGRKVLAYTVYTGTRDTTSRLKMLLEQEGFRVAVLRASVDASRRED
WIAEQLDRGIDVLITNPELVKTGLDLLDFPTIVFMQSGYNVYSLQQAARRSWRIGQKQPVRVIYLGYAGSSQMTCLELMA
KKIMVSQSTSGDVPESGLDVLNQDGDSVEVALARQLVAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C71 AAN62165.1 conserved hypothetical plasmid protein Not tested PAGI-2(C) Protein 0.0 97
ORF SG81 AAN62302.1 conserved hypothetical plasmid protein Not tested PAGI-3(SG) Protein 0.0 87
unnamed ABR13404.1 putative helicase Not tested PAGI-5 Protein 0.0 72
RL063 AAP84188.1 plasmid related protein Not tested PAPI-1 Protein 0.0 71
pph67 CAI36108.1 superfamily II DNA/RNA helicase Not tested PPHGI-1 Protein 0.0 70
yea AAW83099.1 Yea Not tested GGI Protein 9e-175 50