Gene Information

Name : NH44784_008511 (NH44784_008511)
Accession : YP_008027953.1
Strain : Achromobacter xylosoxidans NH44784-1996
Genome accession: NC_021285
Putative virulence/resistance : Unknown
Product : Type IV secretory pathway, VirB4 components
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 919504 - 922383 bp
Length : 2880 bp
Strand : -
Note : -

DNA sequence :
ATGGCCTGGTCGCTGCCGTGGCCGCGCAAAGCCATCTCGCCTGTCCCAACCGATGCTGGCGAGCCCGATGCGTGGGAGCG
GCACGTTGCCACGCTGAACGCCCATGGGATTCCCGCGCCGGGCGAAGCCTTGCATCGTGGCAAACGCAAGCCGGCGACCC
AGGCCGACGTCGAGGCGCTCTACGACGTTTCGCCATCATTCGTCGATCTGCTGCCCTGGGCCGAATACCTGCCTGGCTCG
AAGAGCATGTTGCTGGACGACGGGCAATCCGTCGCCGCTTTTTTCGAGCTGCTGCCGATCGGCACCGAAGGCCGCGAGAT
GGGCTGGCTGTGGCACGCTCGCGATGCGGTGGAGAACGCCTTGCAGGATTCGTTCGACGAACTCGACGAGCATCCGTGGG
TGGTGCAGTTCTACGCCCAGGATGAGCCGGATTTCGACGATTACATGGGGGTGCTGCAAGACTACGTGCGCCCCCGTTCG
CAAGACAGCGCTTTCAGCGCGTTCTATCTCCGGTTCTTCGCGCACCACCTGCGCGCGATCGCCACGCCGGGCGGCCTCTT
CGAGGATACGACCGTCACGCGCCTGCCTTGGCGCGGACAGGTCCGGCGCGTCCGCATGGTGGTCTACCGGCGCACGCCCA
CGGTCGCCAATGCGCGTCGCGGCCAGACGCCCGAACAGGCGCTCACCACCATCTGCGACCGGCTTACCGGCGGTCTGGCA
AACGCCGGGGTGAAGACTCGGCGGCTTGACGCGGCGGCCATCCATGCCTGGCTGCTGCGCTGGTTCAACCCGGCGCCGAC
GATGCTCGGCGACACGCCGGAGGACCGGGAACGCTTCTACGCGCTCACCCGCTACCCGGACGAGCACGATGAGGGCGAGA
TCGAGCTGGCGAGCGGCACGGACTTCGCGCAGCGACTGTTCTTCGGCCAGCCGCGCTCCGACCTGGCGAACGGCACGTGG
ATGTTCGACGGTATGCCGCACCGGATCATCTCTATGGACCGGCTGCGCACGCCACCGGCGACTGGCCACCTGACCGGCGA
AACGCGCAAGGGTGACGCGCTCAATGCGCTGATGGACCAGATGCCCGAGGACACGGTGCTGTGCCTCACGCTCGTCGCCA
CGCCGCAGGACGTGCTCGAAGCTCATCTGAACCACCTGAGCAAGAAGTCGGTCGGCGAAACGCTCGCCTCCGAACAGACC
CGTCAGGACGTACAACAGGCGCGCAGCCTGATCGGCAGCGCCCACAAGCTGTACCGCGGCGCGGTCGCGTTCTACCTGCG
CGGGCGCGACCTGGACGAACTCGACGCGCGCGGCCTGCAACTGGTCAACGTGATGCTCAACGCGGGCGTGCAGCCGGTAC
GTGAGGAAGACGAAGTTGCACCGCTCAACAGCTACCTGCGCTGGTTGCCCGCCGTGTTCGACCCGTCCGCCGACAAGCGA
CAGTGGTACACGCAGCTCATGTTCGCGCAGCACGCGGCGAACCTCGCGCCGGTCTGGGGCCGCAGCATGGGTACAGGGCA
TCCAGGCATCACGTTCTTCAACCGCGGCGGTGGGCCGATCACCTTCGACCCGCTCAATCGCCTGGACCGACAGATGAACG
CGCACCTGTTCCTGTTCGGGCCGACCGGCTCGGGCAAGAGCGCCACGCTCAACAACATCCTGAACCAGATCACGGCGATC
TACCGGCCACGCCTTTTCATCGTCGAGGCCGGCAACTCGTTCGGACTGTTCGGGGATTTCGCCGCGCGGCTCGGACTGTC
GGTGCATCGGGTCAAGCTCTCGCCCGGCTCTGGGGTGAGCCTCGCGCCGTTCGCCGATGCGTGGCGGCTGGTGGCCACGC
CGAGCCAGGTGCAGACGCTCGATGCCGATGCGCTGGACGAAGCGCCGGATGCCAATGCCGCGACCGAGGGTGACGAGCAG
CGCGACGTGCTCGGTGAACTGGAGATCACCGCGCGGCTGATGATTACCGGCGGCGAGGACAAGGAAGAAGCGCGCATGAC
GCGCGCCGACCGTAGCCTGATTCGCCAGTGCATCCTGGACGCGGCGCAGCGCTGCGTGGCAGACCAGCGCCCGGTGCTCA
CGCGAGACGTGCGCGACGCGCTGCGCGAGCGCGGCGGCGACGCAACGCTCCCCGAAATGCGGCGCACCCGGCTACTCGAA
ATGGCCGACGCCATGAACCTGTTTTGCCAGGGCGTCGACGGCGAGATGTTCGACCGGCCTGGCACGCCCTGGCCCGAAGC
CGACGTTACCGTGGTGGACCTCGCCACCTTTGCGCGCGAGGGCTACAACGCACAGCTTTCGATCGCCTACATCAGCCTCA
TCAACACGGTGAACAACATCGCCGAGCGCGACCAGTTCCTTGGGAGGCCGATCATCAACGTCACCGACGAAGGCCACATC
ATCACCAAGAACCCGTTGCTCGCGCCCTACGTGGTCAAAATTACGAAAATGTGGCGCAAACTCGGCGCGTGGTTCTGGCT
GGCGACGCAGAACCTGGACGACCTGCCGATGGCGGCCGAGCCGATGCTCAACATGATCGAGTGGTGGATCTGCCTGTCCA
TGCCACCCGATGAAGTCGAGAAGATCGCGCGCTTCCGCGAGCTGAACCCTTCGCAGAAAGCGCTGATGCTGTCGGCACGC
AAGGAGGCCGGCAAGTTCAGCGAGGGCGTCATCCTCTCCAAGAGCATGGAAGTGCTGTTTCGTGCCGTCCCGCCCAGCCT
CTACCTCGCCATGGCGATGACCGAACCCGAGGAGAAGGCCGAACGGTATCAATTGATGCAGCAGTACGGCATCAGCGAAC
TTGATGCGGCGTTCAAAGTGGCCGAGAAGATCGACCACGCGCGCGGTATCGCCTCGCTCCCGCTCGATGCGTTGGCCTGA

Protein sequence :
MAWSLPWPRKAISPVPTDAGEPDAWERHVATLNAHGIPAPGEALHRGKRKPATQADVEALYDVSPSFVDLLPWAEYLPGS
KSMLLDDGQSVAAFFELLPIGTEGREMGWLWHARDAVENALQDSFDELDEHPWVVQFYAQDEPDFDDYMGVLQDYVRPRS
QDSAFSAFYLRFFAHHLRAIATPGGLFEDTTVTRLPWRGQVRRVRMVVYRRTPTVANARRGQTPEQALTTICDRLTGGLA
NAGVKTRRLDAAAIHAWLLRWFNPAPTMLGDTPEDRERFYALTRYPDEHDEGEIELASGTDFAQRLFFGQPRSDLANGTW
MFDGMPHRIISMDRLRTPPATGHLTGETRKGDALNALMDQMPEDTVLCLTLVATPQDVLEAHLNHLSKKSVGETLASEQT
RQDVQQARSLIGSAHKLYRGAVAFYLRGRDLDELDARGLQLVNVMLNAGVQPVREEDEVAPLNSYLRWLPAVFDPSADKR
QWYTQLMFAQHAANLAPVWGRSMGTGHPGITFFNRGGGPITFDPLNRLDRQMNAHLFLFGPTGSGKSATLNNILNQITAI
YRPRLFIVEAGNSFGLFGDFAARLGLSVHRVKLSPGSGVSLAPFADAWRLVATPSQVQTLDADALDEAPDANAATEGDEQ
RDVLGELEITARLMITGGEDKEEARMTRADRSLIRQCILDAAQRCVADQRPVLTRDVRDALRERGGDATLPEMRRTRLLE
MADAMNLFCQGVDGEMFDRPGTPWPEADVTVVDLATFAREGYNAQLSIAYISLINTVNNIAERDQFLGRPIINVTDEGHI
ITKNPLLAPYVVKITKMWRKLGAWFWLATQNLDDLPMAAEPMLNMIEWWICLSMPPDEVEKIARFRELNPSQKALMLSAR
KEAGKFSEGVILSKSMEVLFRAVPPSLYLAMAMTEPEEKAERYQLMQQYGISELDAAFKVAEKIDHARGIASLPLDALA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C47 AAN62141.1 hypothetical protein Not tested PAGI-2(C) Protein 0.0 81
ORF SG57 AAN62279.1 hypothetical protein Not tested PAGI-3(SG) Protein 0.0 80
virB4 CAI36125.1 VirB4 component Not tested PPHGI-1 Protein 0.0 68
unnamed ABR13362.1 hypothetical protein Not tested PAGI-5 Protein 0.0 63
RL022 AAP84149.1 conserved hypothetical protein Not tested PAPI-1 Protein 0.0 62
EXA33 ABD94642.1 conserved hypothetical protein Not tested ExoU island A Protein 0.0 62
YE3482 YP_001007641.1 hypothetical protein Not tested YAPI Protein 0.0 52
STY4573 NP_458658.1 hypothetical protein Not tested SPI-7 Protein 0.0 52
YpsIP31758_3705 YP_001402659.1 hypothetical protein Not tested YAPI Protein 0.0 52
api39 CAF28513.1 hypothetical protein Not tested YAPI Protein 0.0 52
PMI2576 YP_002152295.1 hypothetical protein Not tested Not named Protein 0.0 50
Pmu_03070 YP_005176206.1 conjugative transfer ATPase TraC-like, PFL family Not tested ICEPmu1 Protein 0.0 48