|
Name : NH44784_008011 (NH44784_008011) Accession : YP_008027904.1 Strain : Achromobacter xylosoxidans NH44784-1996 Genome accession: NC_021285 Putative virulence/resistance : Virulence Product : DNA-binding response regulator KdpE Function : - COG functional category : - COG ID : - EC number : - Position : 859261 - 859953 bp Length : 693 bp Strand : + Note : - DNA sequence : ATGTTCGACTTTCAGCCCACCGTCCTCATCATCGAGGACGACGCCAATATCCGCCGCTTCGTGCGCCAGGCCCTCGAGAG CGAAGGCTGTGCCGTGTACGAAGCCGACACCGTCAAGCGCGGCCTGATCGAGGCCGGCACGCGCCAGCCCGACGCCGTGG TGCTGGACCTGGGCCTGCCGGATGAAGACGGCATGACCCTGATCCGCGAACTGCGCGGCTGGACCGAAGTGCCGGTGCTG GTGCTGTCGGCGCGCACCGCCGAGGCCGACAAGGTGGCGGCGCTGGACGCCGGCGCCGACGACTACCTCACCAAGCCATT CGGCGTCAGCGAACTGCTGGCGCGGCTGCGCGTGCTGCTGCGGCGCCATGCCCGCGGCGGCGCCGGCAGCGCCGCCGAGA TCAGCTTCGGCGACGTGCGCGTCGACTTCGCCAGGCGCGTGGTCGAGCGCGGCGGCCAGCACGTGCACCTGACCGCGATG GAATACCGCCTGCTGGCCGCGCTGCTGGCCCATCGTGGCAAGGTCATGACCCACCGCGAACTGCTGCGCGAGGTCTGGGG GCCTTCGCACGTGGAAAGCAATCACTACCTGCGCATCTACATGGGCCACCTGCGGCAGAAACTCGAAGCGGATCCGGCCC AGCCGGTCTATCTGCTGACCGAAATCGGCGTGGGCTACCGCTTCGCCGGCTAG Protein sequence : MFDFQPTVLIIEDDANIRRFVRQALESEGCAVYEADTVKRGLIEAGTRQPDAVVLDLGLPDEDGMTLIRELRGWTEVPVL VLSARTAEADKVAALDAGADDYLTKPFGVSELLARLRVLLRRHARGGAGSAAEISFGDVRVDFARRVVERGGQHVHLTAM EYRLLAALLAHRGKVMTHRELLREVWGPSHVESNHYLRIYMGHLRQKLEADPAQPVYLLTEIGVGYRFAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ef0091 | AAM75294.1 | EF0091 | Not tested | Not named | Protein | 2e-35 | 43 |
| EF0571 | NP_814337.1 | DNA-binding response regulator | Not tested | Not named | Protein | 3e-35 | 43 |
| SH0031 | YP_251946.1 | hypothetical protein | Not tested | SCCmec | Protein | 3e-25 | 42 |
| kdpE | BAA82188.1 | KDP operon transcriptional regulatory protein KdpE | Not tested | Type-II SCCmec | Protein | 1e-24 | 41 |
| kdpE | YP_039536.1 | response regulator protein | Not tested | Type-II SCCmec | Protein | 1e-24 | 41 |
| kdpE | NP_370594.1 | transcriptional regulator kdpE | Not tested | Type-II SCCmec | Protein | 1e-24 | 41 |
| kdpE | NP_373306.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 1e-24 | 41 |
| kdeP | YP_190033.1 | DNA-binding response regulator KdeP | Not tested | Type-II SCCmec | Protein | 1e-24 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| NH44784_008011 | YP_008027904.1 | DNA-binding response regulator KdpE | VFG1390 | Protein | 8e-28 | 42 |
| NH44784_008011 | YP_008027904.1 | DNA-binding response regulator KdpE | VFG1389 | Protein | 4e-22 | 42 |
