Gene Information

Name : NH44784_062511 (NH44784_062511)
Accession : YP_008033310.1
Strain : Achromobacter xylosoxidans NH44784-1996
Genome accession: NC_021285
Putative virulence/resistance : Virulence
Product : Probable fimbrial chaperone protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6717288 - 6718034 bp
Length : 747 bp
Strand : +
Note : -

DNA sequence :
GTGAAACGCAAACATCTGAGAGGCCTGCTGCTGGGCGCCGCGCTGGCATGGGGGCTTTGCGCCCAGGCCGCGGTCAACGT
CGACCGCACCCGCATCATCATGGGCAGCAACCAGAAATCGGTGTCGGTCGTCCTGAGCAACGAAAGCCATGACACCCCGT
ACCTGGCGCAAGCCTGGATCGAGGACGCCGACGGCAAGACAATCAGCGACCTGGTGGCGCTGCCGCCGCTGCAGCGGATC
GATGGCGGCAAGAAGGCCCAGGTGCGCATCATGCGCGCCAACGACGCCTTCACCGCACGCCTGCCACAGGACCGCGAGAC
CCTGTTCTATTTCAATGTGCGCGAGATTCCCCCGGAACCGCCCAAGACCGACGCCAACATCCTGCAGCTGACCACGCAAA
GCCGGCTGAAGCTGCTGCTGCGCCCGGCGGCGCTCGGCAAGAGCGACGAGGTCAATCCGGAAAGGTCGCTGCAGATCCAG
GCACGCGGCAACAGCCTGACGCTGAAAAACCCCACGCCGTACTACGTCACGGTGATCTGGCTGGGACGCGATGTGAAGCA
GCCGCTGCCAGGTTTCGATAACGCGCCAATGCTGGCGCCGTTCTCGGAACAGGAGGTCAAGGCGACGCTGCCGCCGGACG
TCGGCGAGCTGGTGCTGGGCAATGTCGACGACTATGGCGGATTGCGCATGAACCGCTATCGCTGCGCGGCGGGGCAGTGC
GTTTTCCAGGAACGCCTGCGTCAGTAG

Protein sequence :
MKRKHLRGLLLGAALAWGLCAQAAVNVDRTRIIMGSNQKSVSVVLSNESHDTPYLAQAWIEDADGKTISDLVALPPLQRI
DGGKKAQVRIMRANDAFTARLPQDRETLFYFNVREIPPEPPKTDANILQLTTQSRLKLLLRPAALGKSDEVNPERSLQIQ
ARGNSLTLKNPTPYYVTVIWLGRDVKQPLPGFDNAPMLAPFSEQEVKATLPPDVGELVLGNVDDYGGLRMNRYRCAAGQC
VFQERLRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
papD NP_755464.1 PapD protein Virulence PAI I CFT073 Protein 3e-29 42
prfD CAD42028.1 PrfD protein Virulence PAI II 536 Protein 1e-33 42
papD YP_854253.1 pilus assembly protein chaperone PapD Virulence PAI I APEC-O1 Protein 3e-33 42
papD_2 NP_757033.1 PapD protein Virulence PAI II CFT073 Protein 3e-33 42
papD YP_002414014.1 Chaperone protein PapD Not tested Not named Protein 3e-33 42
papD AAZ04423.1 P pilus chaperone Virulence PAI I APEC-O1 Protein 2e-33 42
papD AAL67413.1 PapD Virulence PAI II CFT073 Protein 2e-33 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NH44784_062511 YP_008033310.1 Probable fimbrial chaperone protein VFG0885 Protein 1e-29 42
NH44784_062511 YP_008033310.1 Probable fimbrial chaperone protein VFG1547 Protein 8e-34 42
NH44784_062511 YP_008033310.1 Probable fimbrial chaperone protein VFG0896 Protein 1e-33 42