Gene Information

Name : NH44784_062441 (NH44784_062441)
Accession : YP_008033303.1
Strain : Achromobacter xylosoxidans NH44784-1996
Genome accession: NC_021285
Putative virulence/resistance : Virulence
Product : Co-activator of prophage gene expression IbrA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6708507 - 6709730 bp
Length : 1224 bp
Strand : +
Note : -

DNA sequence :
ATGGCGGTGAAGCACTACCGCGATCTCAACGTCCACGATGCCGCCAAGGCGCGCCTGCGGCTGGTGTTCCAGCACTTCGA
ACGCGTGTGCGTGGCCTTCTCCGGCGGCAAGGACAGTTCCGTCACGCTGCACCTGGCGCTGGAGGTCGCCCGCGAAATGA
AGCGCGGCCCGGTGCATGCCGTGTTCATCGACCTCGAAGGGCAATACCAGGCCACCATCGCGCACGTCACCGAAATGTTC
AACCGGCCCGACGTCCAGCCGTGGTGGGTCTGCCTGCCGATCAACCTGCGCAACGCGTCCAGCCTGCGCGAACCCTACTG
GTGCGCCTGGGAACCGGGCCGCGAGGCCGACTGGATCCGCCCCCTGCCGAGCCATCCCTCGGTCATCAGCGACCCCGCCC
GATTCCCGTTCTATCGCCACCGCATGGAGTTCGAGGAATTCGTGCCCGAATTCAACCGTTGGCTGGCGCGCGACGCGTCC
ACCGCGTTCCTGGTCGGCATCCGTTCCGACGAATCGCTCAACCGCTACCTCGCGGTCAAGCGCCGCACCAAGAAATGCGC
CTGGACGCCCCCCAGCGCGCACAAACCGCTGCCCTGGAGCACCAGCGACAAATCCGGCGACGGCGGCGTCACCTTCTTTC
CGATCTACGACTGGAAATTCGAAGACCTGTGGCGCTACACCGGCGAGCACGGCCACGCCTACAACCGCCTCTACGACCAG
ATGCTGCGGGCGGGCGTGGCGTTTTCTCAGATGCGCATCTGCCAGCCCTACGGCGACGACCAGCGCAAGGGCCTGGACCT
GTTCCACAAGCTCGAACCCGACACCTGGTTCCGCACGGTCAAGCGCGTCGAAGGCGCCAACTACGCGGCCCGCTATTGCC
GCCAGCGCTTTCTCGGCTACCGCGGCGGCCTGGGCCTGCCGCCCACCTTCAGCACCTGGCGCCAATACTGCCAGTTCCTG
CTCGACAGCATGCCGGCCGCGTTGCGCCAGGTCTACGCGCGGCGCATCGATGTCTTCATCCAGTGGTGGGAGCAACGCGG
CCATCCCCTGTCGATGTGGCCGGACGCGGGCGTTCCCGATCTCGAGAACCGCAAGGCGCAACCGTCATGGCGGCGCATCG
GCCTGTCACTGCTCAAGCAGGACATGGCGCGCTCCCTGTCATTCGGTCCCGCCCGGCGCGATATCGATACCCTGCTTCCC
GCCAAGCCCCGCGCCGTCCCATGA

Protein sequence :
MAVKHYRDLNVHDAAKARLRLVFQHFERVCVAFSGGKDSSVTLHLALEVAREMKRGPVHAVFIDLEGQYQATIAHVTEMF
NRPDVQPWWVCLPINLRNASSLREPYWCAWEPGREADWIRPLPSHPSVISDPARFPFYRHRMEFEEFVPEFNRWLARDAS
TAFLVGIRSDESLNRYLAVKRRTKKCAWTPPSAHKPLPWSTSDKSGDGGVTFFPIYDWKFEDLWRYTGEHGHAYNRLYDQ
MLRAGVAFSQMRICQPYGDDQRKGLDLFHKLEPDTWFRTVKRVEGANYAARYCRQRFLGYRGGLGLPPTFSTWRQYCQFL
LDSMPAALRQVYARRIDVFIQWWEQRGHPLSMWPDAGVPDLENRKAQPSWRRIGLSLLKQDMARSLSFGPARRDIDTLLP
AKPRAVP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
z1203 CAD33763.1 Z1203 protein Not tested PAI I 536 Protein 7e-61 44
ibrA ADD91735.1 putative phosphoadenosine phosphosulfate reductase IbrA Not tested PAI-I AL862 Protein 3e-60 43
Z1643 AAQ19139.1 putative phosphoadenosine phosphosulfate reductase Not tested PAI I CL3 Protein 2e-60 43
Z1203 NP_286738.1 hypothetical protein Not tested TAI Protein 1e-59 43
Z1643 NP_287146.1 hypothetical protein Not tested TAI Protein 1e-59 43
APECO1_3502 YP_854308.1 hypothetical protein Not tested PAI I APEC-O1 Protein 5e-60 43
c5209 NP_757057.1 hypothetical protein Not tested PAI II CFT073 Protein 5e-60 43
ORF_31 AAZ04441.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 3e-60 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NH44784_062441 YP_008033303.1 Co-activator of prophage gene expression IbrA VFG1504 Protein 4e-61 44