Gene Information

Name : NH44784_054551 (NH44784_054551)
Accession : YP_008032520.1
Strain : Achromobacter xylosoxidans NH44784-1996
Genome accession: NC_021285
Putative virulence/resistance : Virulence
Product : Lysyl-tRNA synthetase (class II
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 5859438 - 5860961 bp
Length : 1524 bp
Strand : +
Note : -

DNA sequence :
ATGACCGACCACACGACCGCTCCGGCAACCGCCCAGGATGAAAACCGCTTGATCGCCGAACGGCGCGCCAAGCTGGCCAA
ACTGCGCGAGACCGGGGTCGCGTATCCCAACGATTTCGTCCCCGACGCCCGCGCCGCGGCCCTGCACGACAAGTACGACG
ACCAGGAGCAGGAAGCCCTGGCCGCCGCGCCCGTCACCGTCAAGGTCGCCGGCCGCATGATGCTCAAGCGCGTCATGGGC
AAGGCCAGCTTCGCCACGCTGCAGGACAGCACCGGCCGCATCCAGATCTACCTGGACCGCGGCACGCTGGGCGAAGACAG
CTACGCCGCGTTCAAGCAATGGGACATCGGCGACATCATCGCGGTCGAAGGGTCGGTCTTCAAGACCAACAAGGGCGAAC
TGTCGGTGCACGCCGCCACGGCGCGCCTGCTGTCCAAGTCGCTGCGCCCGCTGCCGGACAAGTTCCACGGCGTGGCCGAC
CAGGAACTGCGCTACCGCCAGCGCTACGTCGACCTCATCATGACCGACGCCACGCGCCGCACCTTCGAGGCGCGCAGCAA
GGCCATGGGCAGCATCCGCCAGTTCATGCTGAACGCAGGCTTCCTCGAAGTCGAAACGCCCATGCTGCACCCGATTCCGG
GCGGCGCGGCGGCCAAGCCCTTCGTCACGCACCACAACGCGCTGGACATGGAAATGTTCCTGCGCATCGCGCCCGAGCTC
TATCTCAAGCGCCTCATCGTCGGCGGCTTCGAACGCGTGTTCGAAGTCAACCGCAACTTCCGCAATGAAGGCGTGAGCCC
GCGCCACAACCCGGAATTCACGATGATGGAGTTCTACGCGGCCTTCGCGGACTACCGCTGGCTGATGGACTTCACCGAGG
AACTGATCCGCCAGGCCGCCATCTCGGCCACCGGCAGCGCCGTGCTGACCTACCAGGAACGCGAGCTGGATCTGTCCAAG
CCGTTCGACCGCCTGACCATCTGCGAAGCCATCCTCAAGTACGCCCCCGGCTACACCCAGGCGCAACTGGACGACGTCGC
CTTCGTGCGCGCCGAACTCAAGAAGCTGGGCGCCGATGCCGATGGCCCGGTGCTGGCGCGCGCCGGCCTGGGCGCGCTGC
AATTGGCGCTGTTCGAGGAAACGGCCGAAGCCAAGCTGTGGAACCCCACGTACATCATCGACTACCCGGTCGAGGTGTCG
CCGCTGGCGCGTGCCTCCGATACCCGCGAGGGCATCACCGAGCGCTTCGAGCTGTTCATGACGGGCCGCGAGATCGCCAA
CGGCTTCTCCGAGCTGAACGATCCCGAAGATCAGGCCGAGCGTTTCCGCTCGCAGGTCGAGGCCAAGGACGCCGGCGACG
AGGAAGCGATGTACTACGACGCCGACTACATCCGCGCGCTGGAATACGGCATGCCCCCGACGGGCGGCTGCGGCATCGGC
ATCGACCGCCTGGTGATGCTGCTGACCGACAGCCCCAGCATCCGCGACGTCATCCTCTTCCCGCACCTGCGCCGTGAAGA
CTAA

Protein sequence :
MTDHTTAPATAQDENRLIAERRAKLAKLRETGVAYPNDFVPDARAAALHDKYDDQEQEALAAAPVTVKVAGRMMLKRVMG
KASFATLQDSTGRIQIYLDRGTLGEDSYAAFKQWDIGDIIAVEGSVFKTNKGELSVHAATARLLSKSLRPLPDKFHGVAD
QELRYRQRYVDLIMTDATRRTFEARSKAMGSIRQFMLNAGFLEVETPMLHPIPGGAAAKPFVTHHNALDMEMFLRIAPEL
YLKRLIVGGFERVFEVNRNFRNEGVSPRHNPEFTMMEFYAAFADYRWLMDFTEELIRQAAISATGSAVLTYQERELDLSK
PFDRLTICEAILKYAPGYTQAQLDDVAFVRAELKKLGADADGPVLARAGLGALQLALFEETAEAKLWNPTYIIDYPVEVS
PLARASDTREGITERFELFMTGREIANGFSELNDPEDQAERFRSQVEAKDAGDEEAMYYDADYIRALEYGMPPTGGCGIG
IDRLVMLLTDSPSIRDVILFPHLRRED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 3e-134 56
lysS YP_005163386.1 lysyl-tRNA synthetase Not tested Not named Protein 8e-81 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NH44784_054551 YP_008032520.1 Lysyl-tRNA synthetase (class II VFG1668 Protein 2e-134 56