Gene Information

Name : NH44784_051301 (NH44784_051301)
Accession : YP_008032195.1
Strain : Achromobacter xylosoxidans NH44784-1996
Genome accession: NC_021285
Putative virulence/resistance : Virulence
Product : ClpB protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5477560 - 5480244 bp
Length : 2685 bp
Strand : -
Note : -

DNA sequence :
ATGGCCACTCCCCTGAAAACCCTGATCGGGAAACTGAACCAGACCTGCCGCCAGGCCGCCGAGCGCGCCGCCAGCCTGTG
CATGGCGCAAGGCCACTACGAGGTGGACCTGGAGCACCTGTTCCTGGCGCTGCTGGAAAAGCCCGCCAGCGATTTCAGCA
TCGTGGCGCGCCGCAGCGGCATCGAGGCCTCGGTGCTGGAGGCCGACCTGAACGCCGAGATCCGCGGCTTCAAGAACGGC
AATACCCGCACCCCGGTGTTTTCGCCGCATCTGCCGCGCCTGTTCGAGCATGCCTGGCTGATCGCCTCGCTGGACACGCA
GACCACCCGCATCCGTTCCGGCCACCTGTTGCTGGCGCTGCTGACCGAGCCCGATCTGGCGGCGCTGGCGCGGCGCGGCT
CGCGCCTGTTCGAGTCGTTCCGGCTGGAAGAGCTGAAGCACGACTTCGCGGCCCTGACGGCCGGCTCGGAAGAGGCCGGC
CAGTCCGTCGCATTGGGCGATGACGCCGCGCAGGGCGAGGCCGCATCACCCGCGGCCGCGCTGTCCAAGACGCCGGCGCT
GGACCAATACACCACCAACCTGACCGAGCGCGCCCGCGAAGGCAAGATCGATCCGGTGATCGGCCGCGATGCCGAGATCC
GGCAGATGATCGACATCCTGACGCGGCGTCGCCAGAACAATCCCATCCTGACCGGCGAGGCCGGCGTCGGCAAGACCGCG
GTGGTCGAAGGCCTGGCGCTGCGCATCGTGGCCGGCGACGTGCCGCCGGCGCTGGCCGGCGTGGCGCTGCGCACGCTGGA
CATGGGCCTTTTGCAGGCCGGCGCCAGCGTCAAGGGCGAGTTCGAGAACCGCCTGAAAAGCGTGATCGACGAGGTCAAGC
AAAGCCCCACGCCCATCATCCTGTTCATCGACGAGGCCCATACCATGATCGGCGCGGGCGGGCAGGCCGGCCAGAACGAT
GCGGCCAACCTGCTCAAGCCGGCGCTGGCGCGCGGCGAACTGCGCACCATCGCCGCCACCACCTGGAGCGAATACAAGAA
GTACTTCGAGAAGGACGCCGCGCTGGCGCGGCGCTTCCAGGTGGTCAAGGTGGAAGAACCCAGCGAGACGCTTGCCGCCA
GCATGCTGCGCGGCATGGCGCCGCTGATGGAACAGCATTTCGGCGTGCGCATCCTGGACGAAGCGATTGTGGCCGCCGCC
CGCCTGTCGCACCGCTACATCAGCGGCCGCCAATTGCCGGACAAGGCGGTCGGTGTGCTGGACACCGCCTGCGCCCGGGT
GGCATTGGGCCGTAGCGCCACGCCGGCCCTGATCGACGACGCCCGCCACCGCCTGGCGCGCCAGGAAACCGAGCGCGCCG
CCCTGCGCCGCGAGGCCGCCGCCGGCGCCGCGCAGTCGGCCCGCCTGCGCGAGCTGGACGAGGAGATGGCCGCCACCCGC
CAGCAACTGGTCGACGCCGAAGCGCGCCTGGCCCAGGAAAGCGAGCTGGTGCGGCAGATCCACGCGCTGCGCGAGGAGCT
GGAAGCCGCGGGCCAGGAGCCCGAGTCCGAAACCACCGGCAAGCGCCGCGGCGGCAAGGCCGCCGAGCCGACGCCCGCCC
AGGCGCAACTGGCCGAGTTGCAGCAGCAACTGCGCGCCCTGCAGGGCGAGGCGCCGCTGGTGCCGGCCTACGTGGATGCG
CAGGTGATCGCCGAGATCGTCTCGGCCTGGACCGGCATCCCGCTGGGCCGCATGGTCAACGACGAAATCCGCACCGTGCT
GGAACTGCAGCCGCTGCTGGCCGAACGCGTGATCGGCCAGGATCACGCGCTGCACGCCATCGCCCAGCGCGTGCGCACCG
CGCGCGCCGGCCTGGAAGACCCGAACAAGCCCAAGGGCGTGTTCCTGTTCGTCGGCCCCTCCGGCGTGGGCAAGACCGAG
ACCGCGCTGGCGGTGGCCGACATCCTGTACGGCGGCGAGCGCAAGCTGGTTACGATCAACATGAGCGAATACCAGGAGGC
CCACAGCGTCGCGGGCCTGAAGGGCTCGCCGCCCGGCTACGTCGGCTACGGCGAAGGCGGCGTGCTGACCGAGGCCGTGC
GGCGCCAGCCCTACAGCGTGGTGCTGCTGGACGAGATCGAGAAGGCCCATCCCGACGTGCTGGAGCTGTTCTTCCAGGTG
TTCGACAAGGGCGTGATGGACGATGCCGAAGGGCGCGAGATCGACTTCCGCAACACGCTCATCATCCTGACCTCCAACGT
CGGCTCGTCGACCATCATGCAGGCCTGCCTGAACAAGACCGCCGAGGAACGGCCGGACCCGGACGCTTTGCAGGAATTGC
TGGCGCCGCAGCTGTACAAGGCTTTCAAGCCCGCCTTCCTGGGCCGCATGAAGACCATCGCCTACTACCCGGTGGATGAC
GACGCCCTGGCGCGCATCATTGGCCTGAAGCTGGCCCGCATCGCCGAGCGGGTGCAGGCCAACCACCGCGCCGTGTTCGA
TTGGGACGACGCGCTGGTCGAGGCCGTGCTGGCGCGCTGCACCGAGGTGGACACGGGCGCGCGCAACGTCGACCACATCC
TGAACGGCACGCTGCTGCCGCAGATCGCCGAACAGGTGCTGGGCCGCATGGCGCAGGGCGAGGCGATCGCGCGCATCCGC
GTCACGGCCGGCAAGAACGGCGACTTCCGCTACCGCCTGACCTGA

Protein sequence :
MATPLKTLIGKLNQTCRQAAERAASLCMAQGHYEVDLEHLFLALLEKPASDFSIVARRSGIEASVLEADLNAEIRGFKNG
NTRTPVFSPHLPRLFEHAWLIASLDTQTTRIRSGHLLLALLTEPDLAALARRGSRLFESFRLEELKHDFAALTAGSEEAG
QSVALGDDAAQGEAASPAAALSKTPALDQYTTNLTERAREGKIDPVIGRDAEIRQMIDILTRRRQNNPILTGEAGVGKTA
VVEGLALRIVAGDVPPALAGVALRTLDMGLLQAGASVKGEFENRLKSVIDEVKQSPTPIILFIDEAHTMIGAGGQAGQND
AANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQVVKVEEPSETLAASMLRGMAPLMEQHFGVRILDEAIVAAA
RLSHRYISGRQLPDKAVGVLDTACARVALGRSATPALIDDARHRLARQETERAALRREAAAGAAQSARLRELDEEMAATR
QQLVDAEARLAQESELVRQIHALREELEAAGQEPESETTGKRRGGKAAEPTPAQAQLAELQQQLRALQGEAPLVPAYVDA
QVIAEIVSAWTGIPLGRMVNDEIRTVLELQPLLAERVIGQDHALHAIAQRVRTARAGLEDPNKPKGVFLFVGPSGVGKTE
TALAVADILYGGERKLVTINMSEYQEAHSVAGLKGSPPGYVGYGEGGVLTEAVRRQPYSVVLLDEIEKAHPDVLELFFQV
FDKGVMDDAEGREIDFRNTLIILTSNVGSSTIMQACLNKTAEERPDPDALQELLAPQLYKAFKPAFLGRMKTIAYYPVDD
DALARIIGLKLARIAERVQANHRAVFDWDDALVEAVLARCTEVDTGARNVDHILNGTLLPQIAEQVLGRMAQGEAIARIR
VTAGKNGDFRYRLT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 5e-145 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NH44784_051301 YP_008032195.1 ClpB protein VFG2076 Protein 0.0 52
NH44784_051301 YP_008032195.1 ClpB protein VFG2084 Protein 6e-148 46