Gene Information

Name : NH44784_042871 (NH44784_042871)
Accession : YP_008031352.1
Strain : Achromobacter xylosoxidans NH44784-1996
Genome accession: NC_021285
Putative virulence/resistance : Virulence
Product : Flagellar biosynthesis protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4580617 - 4581399 bp
Length : 783 bp
Strand : -
Note : -

DNA sequence : 
ATGAGCTTGCCCAACTCCCCTCGCGCCCGCCGCGGCGCGCTGCCCCTGCTGGGCGCCGCCGCCCTGCTGGGCCTGGCCCT
GTTCCCCGCCGGCGTGGTGGCGCAGGCGACGCTGCCGGCCCTGACCGCGACGCCGGGCCCGGGCGGTTCCGAAACCTATT
CGCTCAGCATGCAGACGCTGCTGCTGATGACGTCGCTGTCGTTCCTGCCCGCGGCGCTGCTGATGATGACCGGTTTCACC
CGCATCATCATCGTGCTCGGCCTGCTGCGCAGCGCCATGGGCACGGCCATGTCGCCGCCCAACCACGTGCTGATCGGCCT
GGCGCTGTTCCTGACCTTCTATACGATGTCGCCGGTGTTCGACAAGATCTACACCGACGCCTACAAGCCGCTGTCCGAGG
GCTCGATCCAGTTCGAGGCCGCGGTCGAGCGCGCCGCCGGCCCGCTGCGCACCTTCATGCTGCACCAGACCCGCGAGAAC
GACCTGGCGCTGTTCGCCAACCTGGCCAAGCAGCCGGCGCTGGAAGACCCCTCGCAGGTGCCGCTGCGCATCCTGGTGCC
GGCCTTCATCACCAGCGAACTCAAGACCGCCTTCCAGATCGGCTTCACCATCTTCATTCCGTTCCTGATCATCGACCTGG
TGGTGGCCAGCGTACTGATGGCGCTGGGCATGATGATGGTGCCGCCCGTCACCGTGGCGCTGCCGTTCAAGCTGATGCTG
TTCGTGCTGGCCGACGGCTGGAACCTGCTGATGGGCTCGCTGGCCCAGAGCTTCTACCAATAG

Protein sequence : 
MSLPNSPRARRGALPLLGAAALLGLALFPAGVVAQATLPALTATPGPGGSETYSLSMQTLLLMTSLSFLPAALLMMTGFT
RIIIVLGLLRSAMGTAMSPPNHVLIGLALFLTFYTMSPVFDKIYTDAYKPLSEGSIQFEAAVERAAGPLRTFMLHQTREN
DLALFANLAKQPALEDPSQVPLRILVPAFITSELKTAFQIGFTIFIPFLIIDLVVASVLMALGMMMVPPVTVALPFKLML
FVLADGWNLLMGSLAQSFYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 9e-29 43
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 9e-29 43
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 9e-29 43
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 6e-28 42
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 7e-30 41
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 7e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NH44784_042871 YP_008031352.1 Flagellar biosynthesis protein FliP VFG2338 Protein 1e-69 75
NH44784_042871 YP_008031352.1 Flagellar biosynthesis protein FliP VFG2494 Protein 3e-67 71
NH44784_042871 YP_008031352.1 Flagellar biosynthesis protein FliP VFG1259 Protein 1e-55 60
NH44784_042871 YP_008031352.1 Flagellar biosynthesis protein FliP VFG2016 Protein 2e-53 59
NH44784_042871 YP_008031352.1 Flagellar biosynthesis protein FliP VFG0044 Protein 2e-33 42
NH44784_042871 YP_008031352.1 Flagellar biosynthesis protein FliP VFG0394 Protein 1e-30 41
NH44784_042871 YP_008031352.1 Flagellar biosynthesis protein FliP VFG0188 Protein 2e-30 41