Gene Information

Name : NH44784_004201 (NH44784_004201)
Accession : YP_008027526.1
Strain : Achromobacter xylosoxidans NH44784-1996
Genome accession: NC_021285
Putative virulence/resistance : Unknown
Product : Transcription accessory protein (S1 RNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 427766 - 430141 bp
Length : 2376 bp
Strand : +
Note : -

DNA sequence :
ATGTCTGAAACTTCCGTTATCACGAACGTCGCCGCCGGCGTCGACAATGCCCGTATCGTGGCCCAGCTCGCCACCGAGCT
TGGCGCCCGCGCCTCCCAGATCGCCTCGGCAGTGGAACTGCTGGATGACGGCGCCACCGTGCCGTTCATCGCACGCTACC
GCAAGGAAGCCACCGGCGGCCTGGACGACACCGTCCTGCGCAATCTGGAAGTGCGCCTGGGCTACCTGCGCGAACTCGAA
GAGCGCCGTGGCGCGATCCTCGAATCGATCTCGCAGCAAGGCAAGCTCACGCCCGAACTGCAGCAGGAAATCGCCACCGC
CGATACCAAGCAGCGTCTGGAAGACCTGTACGCGCCGTACAAGCCCAAGCGCCGCACCCGCGCCCAGATCGCGCGTGAAG
CCGGCCTGGAACCGCTGGCCGACGCCATCCTGGCCGACACCGCGTGCGATCCGGCCGCGCTGGCCGCCCAATACCTGAAT
CCCGAAGCCTCGATCAACGATGCCAAGGCGGCGCTGGACGGCGCCCGCGACATTCTGGCCGAGCGCTACGCCGAGAACGC
CGACCTGCTGGCCGACATGCGCGAGCACCTCTGGTCCACCGGCTATCTGTATTCCAAGATGGTCGACGGCAAGGAAACCG
AAGGCGCCAACTTCCGCGACTGGTTCGACTTCAACGAGCCGCTGCGCACGCTGCCGTCGCACCGCATCCTGGCGCTGTTG
CGCGGCCGCCAGCAAGGCGTGCTGGAAATCCGCCTGGGCCTGGAAGCCGAACTCGAAGCGCAACTGCCGCATCCCTGCGT
GGCGCGCATCGCCAGCTTCCTCAAGCTGGGCAACGGCCTGTTCGCGCTGGACGCCTCGCCGCGCGCGCGCTGGCTGGGCG
AAGTCTGCCGCTGGACCTGGCGCGTCAAGCTGGTGACGGCCTTCGAAAGCGAACTGATCGGCCGCCTGCGCGAGACCGCC
GAGGCCGAAGCCATCCGCGTGTTCGCCGCCAACCTGAAGGATCTGCTGCTGGCCGCGCCGGCCGGCCCCAAGGCCGTGCT
GGGCCTGGATCCCGGCATCCGCACGGGCTGCAAGGTGGCGGTGATCGACCGCACCGGCAAGGTGGTCGACACCACCACTG
TCTACCCGTTCGAGCCGCGCCGCGACCGCGAGGGCACCATCAACACCCTGGCCGCGCTGGTCGCGCGCCACAAGGTCGAC
CTGATCGCCATCGGCAACGGCACCGCCTCGCGCGAAAGCGAGAAGCTGGTGGGCGACATGCAGGAACGCTTCCCCGACCT
GAAGGTGACGCGGGTGGTCGTGTCCGAGGCCGGCGCCTCGGTCTATTCGGCCTCCGAGACCGCCGCCCAGGAATTCCCCG
ACCTGGACGTGACGCTGCGCGGCGCCGTGTCGATCGCGCGCCGCCTGCAGGATCCGCTGGCGGAACTGGTCAAGATCGAT
CCCAAGGCCATCGGCGTGGGTCAGTACCAGCATGACGTCAACCAGCGCGAGCTGGCGCGTTCGCTGGACGCGGTGGTCGA
GGATTGCGTGAACGCGGTCGGCGTCGACGTCAACACGGCATCCGCGGCGCTGCTGGCGCGCGTGTCGGGCCTGAACTCGC
TGCTGGCCAAGAACATCGTGGCGTGGCGCGACGAGAACGGCGCCTTCCCCACCCGTGAACAACTGCGCAAGGTGCCGCGC
TTTGGCGACAAGGCGTTCGAGCAGGCCGCCGGCTTCCTGCGCATCCCCAACGGCGACAACCCGCTGGACGCCTCGTCGGT
GCACCCGGAAGCCTATCCGGTGGTCGAGCGCATCGTCGCCAAGATCAAGGCGGAAGTGAAACAGATCATCGGCCAGCGCG
ACGCGCTCAAGGGCGTGTCGCCGTCTGATTTCACGGACGAACGCTTCGGCCTGCCGACGGTGCGCGACATCTTCGCCGAA
CTGGAAAAGCCCGGCCGCGATCCGCGTCCCGAGTTCAAGACCGCGCAGTTCAAGGAAGGCGTCGAGACGCTCAACGATCT
GTACCCCGGCATGGTGCTCGAAGGCGTGGTGACCAACGTCGCCAACTTCGGCGCGTTCGTCGACATCGGCGTGCACCAGG
ACGGCCTGGTCCACATCTCGGCATTGGCCGAGAAGTTCGTGAAGGATCCGCGCGACGTCGTGCGCGTCGGCCAGACGGTC
AGCGTGAAGGTGCTGGAAGTGGACGTGGCGCGCAAGCGCGTGGCCCTGACCATGCGCCTGAACGACACCGCCGCCCCGGC
GCGCCGAGGCGCTGATGCCCCCAAGAGCGGCGATCGTCCCGGACGCCGTCCCCAGGGCGACAATGGCCGCGGCAACGCCG
GCGGCGCCGGCATGAACAGTGCCATGGCCGACGCATTCGCCAAGCTTAAGCGTTGA

Protein sequence :
MSETSVITNVAAGVDNARIVAQLATELGARASQIASAVELLDDGATVPFIARYRKEATGGLDDTVLRNLEVRLGYLRELE
ERRGAILESISQQGKLTPELQQEIATADTKQRLEDLYAPYKPKRRTRAQIAREAGLEPLADAILADTACDPAALAAQYLN
PEASINDAKAALDGARDILAERYAENADLLADMREHLWSTGYLYSKMVDGKETEGANFRDWFDFNEPLRTLPSHRILALL
RGRQQGVLEIRLGLEAELEAQLPHPCVARIASFLKLGNGLFALDASPRARWLGEVCRWTWRVKLVTAFESELIGRLRETA
EAEAIRVFAANLKDLLLAAPAGPKAVLGLDPGIRTGCKVAVIDRTGKVVDTTTVYPFEPRRDREGTINTLAALVARHKVD
LIAIGNGTASRESEKLVGDMQERFPDLKVTRVVVSEAGASVYSASETAAQEFPDLDVTLRGAVSIARRLQDPLAELVKID
PKAIGVGQYQHDVNQRELARSLDAVVEDCVNAVGVDVNTASAALLARVSGLNSLLAKNIVAWRDENGAFPTREQLRKVPR
FGDKAFEQAAGFLRIPNGDNPLDASSVHPEAYPVVERIVAKIKAEVKQIIGQRDALKGVSPSDFTDERFGLPTVRDIFAE
LEKPGRDPRPEFKTAQFKEGVETLNDLYPGMVLEGVVTNVANFGAFVDIGVHQDGLVHISALAEKFVKDPRDVVRVGQTV
SVKVLEVDVARKRVALTMRLNDTAAPARRGADAPKSGDRPGRRPQGDNGRGNAGGAGMNSAMADAFAKLKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 0.0 61