Gene Information

Name : NH44784_036331 (NH44784_036331)
Accession : YP_008030707.1
Strain : Achromobacter xylosoxidans NH44784-1996
Genome accession: NC_021285
Putative virulence/resistance : Virulence
Product : DNA repair protein RadC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3880587 - 3880955 bp
Length : 369 bp
Strand : +
Note : -

DNA sequence :
GTGGCCAAGCCATCCGCCGCCATCGACTATATCGTGACGCGGCTGGCCCTGTCGGACGTCGAGGTATTCGGCGTAATGTT
CCTTGATGCGCAATTGAGAATGATCGCCTTCGAGGAAATGTTCAGAGGCACGCTGTCAGAGACCAGCGTGTATCCACGTG
AGGTCGTCAAGGCGGCAATTCGGCACAACGCGCAGTCCATCTTGGTTGCCCACAACCATCCCTCGGGCTCGTCGCAGCCA
AGCAAGGCGGACGTTGAGGTGACGCGGCGCCTGAAGGAAGCCGTTGCTCTGGTAAATGTCTCATTGGTCGACCACGTGAT
CGTGGCGGCGGGTAGCGGCCACTCTATGGCCAAGATGGGCTGGATCTAG

Protein sequence :
MAKPSAAIDYIVTRLALSDVEVFGVMFLDAQLRMIAFEEMFRGTLSETSVYPREVVKAAIRHNAQSILVAHNHPSGSSQP
SKADVEVTRRLKEAVALVNVSLVDHVIVAAGSGHSMAKMGWI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1786 NP_231421.1 DNA repair protein RadC Not tested VPI-2 Protein 6e-26 47
VC0395_A1383 YP_001217326.1 DNA repair protein RadC Not tested VPI-2 Protein 6e-26 47
VPI2_0034 ACA01849.1 DNA repair protein RadC Not tested VPI-2 Protein 4e-26 47
VC0510 NP_230161.1 DNA repair protein RadC-like protein Not tested VSP-2 Protein 2e-24 46
radC AAN62140.1 putative DNA repair protein RadC Not tested PAGI-2(C) Protein 1e-19 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NH44784_036331 YP_008030707.1 DNA repair protein RadC VFG1119 Protein 2e-26 47