Gene Information

Name : NH44784_031381 (NH44784_031381)
Accession : YP_008030220.1
Strain : Achromobacter xylosoxidans NH44784-1996
Genome accession: NC_021285
Putative virulence/resistance : Virulence
Product : Inner membrane ABC-transporter YbtQ
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3371376 - 3373118 bp
Length : 1743 bp
Strand : -
Note : -

DNA sequence :
ATGACGACACCTCCCGCTCCCTGGCGCGACACCTATCGCCGCCTTCTCCGCAGCGCAGGCAGCCAGGCCGGCCGCCTGCG
CGCCAGCCTGTGCCTGTTGCTGGCCGCCGCCGTGTGCCAGGGCCTGTCGCTGGCCTGCATCGTGCCCCTGTTCGTCCACG
TGACCCGCGGCGATCCCTGGCGCGCCGCGCTGGCCTGGCTGGCGGGCTTCACCTTGCTGGCAGCCGCCGCCATCATCCTG
CGCTGGCGCGCGCAGGGCTTCGACTATCGCGGCCACATGGCGCGCGCCACGCACGAGCTGCGCGTGCTGCTGGGCGAGCA
ACTGCGGCGCATGCCGCTGGAGGCGCTGCAGGCCCACCGCACCGGCGGCATCGCCGCCAAGCTGCTGGGCGGCGTCGACG
AGCAGATGAACTACGCGCTGACGGTGATCAACCTGATCCTGGGCGCCGCGGTTACGCCGGCCACGACCGCGCTGGCGCTG
CTGGCCTGGGACTGGCGACTGGGCATGGCGCTGATGCTGGTGTTTCCCGTGATCGTGCCGCTCTACCGCTGGCGCCGGCC
GGCGCTGGATCGCGGGCATGCGGCCACGGGCCGCGCCAATGAAGCCTTGAACGCGGAACTGCTCGAGTACATGCAAGGAC
TGCCCGTGTGCCTGGCGACGGGCCGAGCCGGCGCCGCCAATGAACGCCTGCGCGCCGGCTTCGAGCAGGTGGAACGATTG
CAGCGCGAGCATCACCGGCGCGGCGCCAAGCCGTCGTTGATGGTGGCCGCCATCGTCGAATCCGGGATGCTGGCAATCCT
GGGCTGCGGCATGCTGTGGGTCACCCAGGGGAGCCTGGCTCCCGCGGCTCTCGGCGCGGTACTGGTGCTGGTGGCGCGCT
TTGCCGAGCCGCTGGCGACCTTCGTGAACTTCACCACGATCCTGGCGCTGATCGAGGCCGCCCTGGCCCGCATCGAAGAC
GTACGGGCGGTGGCGCCGCTGCCGCAATGGCCGTCAGAGGGCGGCCCTGGCGGACCGGCGCGCATCCGTATCAACGGTCT
CGAATTCCGCTACGCCGGCGGCAGTGCGCCAGCCCTGCGCGATATCGACCTGGATCTGCCGGCGCGCGGCCTGACCGCGC
TGGTGGGCCCTTCGGGCTCCGGCAAGACCACGCTGACGCGCCTGCTGATGCGGCACGCCGATCCGCAACGCGGCGCGGTC
CGCATCGGCGGCGTGGACATCCGCAGCCTGCCAGCCGCCGACCTGAACCGCCTGATCTCGACCGTGTTCCAGGATGTGCA
CCTGTTCGACGACACCGTGCTCGGCAACATCGGCATGGCAAGGCCCGATGCCAGCGAGGCTGACATCCACGCCGCCGCCC
GCGCGGCCCATTGCCTGGACTTCATCGAGCGCCTGCCGCAAGGCTGGCAGACCCGCCTGGGCGAGGCTGGCGGCAGGCTG
TCGGGCGGCGAACGCCAGCGCCTGTCGATCGCACGCGCCATCCTCAAGAACGCGCCGATCGTGATCCTGGACGAGCCCAC
CGCCGCGCTCGACACCGAGAGCGAACTGGCGGTGCAGGCGGCGATCGATACCCTGGTCGCGGACCGCAGCGTCATCGTGA
TCGCCCACCGCCTGTCGACCATCGTCGCGGCGGATCGCATCCTGGTGTTCGAGGACGGTCGCATCACGCAGCGCGGCACG
CACGCGCAACTGCTGGCTGTCCCGGGCCGCTATCGCCAGATGTGGCTGGCGCAACAGGGCTGA

Protein sequence :
MTTPPAPWRDTYRRLLRSAGSQAGRLRASLCLLLAAAVCQGLSLACIVPLFVHVTRGDPWRAALAWLAGFTLLAAAAIIL
RWRAQGFDYRGHMARATHELRVLLGEQLRRMPLEALQAHRTGGIAAKLLGGVDEQMNYALTVINLILGAAVTPATTALAL
LAWDWRLGMALMLVFPVIVPLYRWRRPALDRGHAATGRANEALNAELLEYMQGLPVCLATGRAGAANERLRAGFEQVERL
QREHHRRGAKPSLMVAAIVESGMLAILGCGMLWVTQGSLAPAALGAVLVLVARFAEPLATFVNFTTILALIEAALARIED
VRAVAPLPQWPSEGGPGGPARIRINGLEFRYAGGSAPALRDIDLDLPARGLTALVGPSGSGKTTLTRLLMRHADPQRGAV
RIGGVDIRSLPAADLNRLISTVFQDVHLFDDTVLGNIGMARPDASEADIHAAARAAHCLDFIERLPQGWQTRLGEAGGRL
SGGERQRLSIARAILKNAPIVILDEPTAALDTESELAVQAAIDTLVADRSVIVIAHRLSTIVAADRILVFEDGRITQRGT
HAQLLAVPGRYRQMWLAQQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
irp7 YP_001006812.1 inner membrane ABC-transporter YbtQ Not tested HPI Protein 2e-112 51
irp7 YP_002346905.1 ABC transporter permease Not tested HPI Protein 5e-113 51
ybtQ NP_669703.1 permease and ATP-binding protein of yersiniabactin-iron ABC transporter Virulence HPI Protein 5e-113 51
ybtQ NP_993010.1 ABC transporter permease Virulence HPI Protein 5e-113 51
ybtQ YP_070127.1 ABC transporter permease Virulence HPI Protein 5e-113 51
ybtQ CAA21387.1 - Virulence HPI Protein 5e-113 51
irp7 CAB46572.1 inner membrane ABC-transporter, Irp7 Virulence HPI Protein 1e-112 51
APECO1_1055 YP_853072.1 ABC transporter Not tested PAI IV APEC-O1 Protein 8e-113 51

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NH44784_031381 YP_008030220.1 Inner membrane ABC-transporter YbtQ BAC0433 Protein 2e-113 51