Gene Information

Name : NH44784_003081 (NH44784_003081)
Accession : YP_008027414.1
Strain : Achromobacter xylosoxidans NH44784-1996
Genome accession: NC_021285
Putative virulence/resistance : Virulence
Product : Two-component system response regulator QseB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 296477 - 297136 bp
Length : 660 bp
Strand : +
Note : -

DNA sequence : 
ATGCGCATCCTTCTCGTAGAAGACGACACCATGATCGGGGAAAGCGTGCTGGACTGCCTGCGCGCCGAGCACTACGCCGT
CGATTGGGTCAAGGACGGCCACGCGGCCGAACTGGCCCTGCGCACCGATCCCTACGACCTCGTATTGCTCGACCTCGGGC
TGCCTCGCCGCGATGGACTGACGCTGTTGCGCGAACTGCGCGCGCGCAAGGACCGCACCCCGGTGCTGATCGCCACGGCG
CGCGACGCCGTCAGCGACCGCATCGCCGGACTGGATGCCGGCGCCGACGACTACATCGTCAAGCCCTATGACGTCGACGA
ACTGCTGGCCCGCATGCGCGCGCTGATCCGCCGCAGCGCGGGCCGCGCCGAGCCGGTGTTCGAACACGAGGGCATCACCA
TCGATCCGCAATCCCACGCCGCCACGGTCGACGGCACGCCGGTGCCGCTGACCGCGCGTGAATGGGCGGTGCTGGAACCG
CTCATCGCGCGGCCCGGCATGATCTTCTCGCGCGCCCAGCTCGAGGAGAAGCTGTACAGCTGGAAGGACAGCGTCAGCAG
CAATGCGGTTGAGGTTTATATTCATGGCCTGCGCAAGAAACTGGGGCAGAACCTGATCCAGAACGTCAGAGGCGTCGGCT
ATGTCATTCCCAAAACATGA

Protein sequence : 
MRILLVEDDTMIGESVLDCLRAEHYAVDWVKDGHAAELALRTDPYDLVLLDLGLPRRDGLTLLRELRARKDRTPVLIATA
RDAVSDRIAGLDAGADDYIVKPYDVDELLARMRALIRRSAGRAEPVFEHEGITIDPQSHAATVDGTPVPLTAREWAVLEP
LIARPGMIFSRAQLEEKLYSWKDSVSSNAVEVYIHGLRKKLGQNLIQNVRGVGYVIPKT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-29 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NH44784_003081 YP_008027414.1 Two-component system response regulator QseB BAC0197 Protein 2e-24 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NH44784_003081 YP_008027414.1 Two-component system response regulator QseB VFG0473 Protein 1e-31 44
NH44784_003081 YP_008027414.1 Two-component system response regulator QseB VFG1390 Protein 9e-26 42