Gene Information

Name : NH44784_030451 (NH44784_030451)
Accession : YP_008030127.1
Strain : Achromobacter xylosoxidans NH44784-1996
Genome accession: NC_021285
Putative virulence/resistance : Unknown
Product : Integrase, catalytic region
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3261756 - 3262613 bp
Length : 858 bp
Strand : -
Note : -

DNA sequence :
GTGTTGCAGGTTGCCTCGTCGGCCTATCGGCGCCATGCCGCGCGGCTGCGCGATCCGGCGCGGCGCAGCGACCGTGCGCA
GCGTGACGAACAGCTCATGCCGCACGTCCAGCGAGTCTGGCAAGAGAACCATCGCGTCTACGGCGCCGACAAGGTCTGGC
GGCAGTTGAACCGCGAAGGCGTGATGGTGGCCCGTTGTACGGTCCAACGACTGATGCGCGCTCAGGGCCTGCAAGGCGTG
CGGCGCGGCAAGCGGCTGCGAACGACCATCGCTGATGATGCGGCCAGCCGTCCAATGGATCGGGTCAACCGGCAGTTCCG
GGCCGAGCGGCCGAACCAGTTGTGGGTCTCGGACTTCACCTACGTCTCGACCTGGCAGGGCTGGCTGTACGTGGCCTTCG
TCATCGACGTCTACGCCCGGCGCATTGTCGGCTGGCGCGTGAGCAAATCCATGACGACGGACTTCGTGCTTGATGCGCTG
GAGCAGGCCCTATACGCCCGCCAGCCTGGCAACGATGGTTCTCTGACCCATCACTCCGATAGGGGATCGCAGTACGTCAG
CATCCGCTATAGCGAACGCCTGGCCGAAGCGGGCATCGAGCCGTCCGTGGGTAGCCGTGGTGACAGTTACGACAACGCCT
TGGCCGAGACCATCAACGGCTTGTACAAGGCTGAACTGATTCACCGCCGCGCACCCTGGAAAACCAGGGAGTCTGTCGAG
CTGGCAACGCTGGAATGGGTCGCCTGGTTCAACCATAAGCGCCTGCACTCATCCATCGGCTATATCCCGCCGGCCGAGGC
TGAGGCAAACTACTACAACCTACTCGGCACATCCGCCGGTGAGGCTGTTTTACTTTAA

Protein sequence :
MLQVASSAYRRHAARLRDPARRSDRAQRDEQLMPHVQRVWQENHRVYGADKVWRQLNREGVMVARCTVQRLMRAQGLQGV
RRGKRLRTTIADDAASRPMDRVNRQFRAERPNQLWVSDFTYVSTWQGWLYVAFVIDVYARRIVGWRVSKSMTTDFVLDAL
EQALYARQPGNDGSLTHHSDRGSQYVSIRYSERLAEAGIEPSVGSRGDSYDNALAETINGLYKAELIHRRAPWKTRESVE
LATLEWVAWFNHKRLHSSIGYIPPAEAEANYYNLLGTSAGEAVLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 3e-61 65
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 1e-61 65
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 4e-70 65
tnpC AAD44736.1 TnpC Not tested SHI-2 Protein 2e-57 64
Z1198 NP_286733.1 transposase Not tested TAI Protein 3e-75 63
Z1638 NP_287141.1 transposase Not tested TAI Protein 3e-75 63
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 1e-75 63
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 9e-73 63
Z1221 NP_286756.1 transposase Not tested TAI Protein 9e-76 63
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 9e-76 62
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 2e-75 62
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 1e-75 62
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 6e-74 62
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 6e-76 62
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 8e-76 62
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 9e-76 62
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 9e-76 62
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 2e-52 62
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 1e-73 61
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 1e-73 61
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 1e-73 61
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 2e-72 60
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 1e-51 49
CDCE8392_1958 YP_005134489.1 transposase-like protein Not tested Not named Protein 7e-34 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NH44784_030451 YP_008030127.1 Integrase, catalytic region VFG1602 Protein 1e-72 60