Gene Information

Name : NH44784_019411 (NH44784_019411)
Accession : YP_008029034.1
Strain : Achromobacter xylosoxidans NH44784-1996
Genome accession: NC_021285
Putative virulence/resistance : Virulence
Product : The iron-vibriobactin/enterobactin uptake porter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2058467 - 2059255 bp
Length : 789 bp
Strand : -
Note : -

DNA sequence : 
ATGGCGCTGCGCGCGCGTGGGCTGACACTGGCGCATGACCTGGGCGCGGTGTGCCAGCAGTTGGACCTCGATATTCCGGC
CGGACGCATTACGGTCATCCTCGGGCCGAACGGGTGCGGCAAGTCGACGCTGTTGCGGGGATTGGCGCGTCTGTTGGCGC
CGCAGGCCGGCACGGTGCTGCTCGACGGCAAGGACCTGCGGCGCTTTGGAGCGCGCGAGCTGGCGGTTCGCCTGGGCTGC
CTGCCGCAGGCGCCGCAAGCCCCCGACGGCATACGGGTGGCGGAGCTGGTGGCGCGTGGCCGCTATCCGCACCAGGCGTT
CTGGCTGCCGTGGCGCGCGGAGGATGACGAGGCGGTACAACGCGCGCTGGAACAGACGCGCTTGACTGCCCTGGCCGATC
GGCCCGTCGACACCTTGTCCGGAGGCCAGCGCCAGCGCGCCTGGCTGGCATTCGCGCTGGCGCAGAACGCGCCTGTGATG
CTGCTCGACGAACCCACCACCTACCTGGATATCGCTCACCAGCTGGAAGTGCTGGATCTGTGCCGCAGTTTGAACCAGCG
GCAGGGCAAGACCCTGGTGATGGTGTTGCACGACCTGAACCAGGCCGCCCGCTATGCCGATCACATCGTGGCGCTGCGCG
ACGGAAAGGTGCAGGCCAGCGGCCCGCCGGCCGAGGTCATCACGCCGGAGCGGGTGCGGCGCCTGTTCGGCATCCGCTGC
GTCGTGATGGCGGATCCCGTGTCCGGGACGCCGCTGGTGGTGCCCGTTTCCAGCGCCGAAACCGACTGA

Protein sequence : 
MALRARGLTLAHDLGAVCQQLDLDIPAGRITVILGPNGCGKSTLLRGLARLLAPQAGTVLLDGKDLRRFGARELAVRLGC
LPQAPQAPDGIRVAELVARGRYPHQAFWLPWRAEDDEAVQRALEQTRLTALADRPVDTLSGGQRQRAWLAFALAQNAPVM
LLDEPTTYLDIAHQLEVLDLCRSLNQRQGKTLVMVLHDLNQAARYADHIVALRDGKVQASGPPAEVITPERVRRLFGIRC
VVMADPVSGTPLVVPVSSAETD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 9e-63 56
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 3e-52 50
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-58 49
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-58 49
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-58 49
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-58 49
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-50 47
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-54 43
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-54 43
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-50 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-50 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-50 41
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-50 41
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 7e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NH44784_019411 YP_008029034.1 The iron-vibriobactin/enterobactin uptake porter BAC0164 Protein 2e-52 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NH44784_019411 YP_008029034.1 The iron-vibriobactin/enterobactin uptake porter VFG0925 Protein 5e-69 54
NH44784_019411 YP_008029034.1 The iron-vibriobactin/enterobactin uptake porter VFG1042 Protein 1e-52 50