Gene Information

Name : NH44784_015541 (NH44784_015541)
Accession : YP_008028648.1
Strain : Achromobacter xylosoxidans NH44784-1996
Genome accession: NC_021285
Putative virulence/resistance : Resistance
Product : Tricarboxylate transport transcriptional regulator TctD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1642795 - 1643466 bp
Length : 672 bp
Strand : +
Note : -

DNA sequence : 
ATGCGCATTCTGCTGGTCGAGGACAACCTCGACCTGGGCGATGCCGTGGAGAGCAAACTGCGTTCGGCGGGCCATAGCGT
ACAGTGGGTGCGCGACGGCGTCGCCGCGCTGCGCTGGGGGCTGGACGAAACATGGGATGCGCTGGTGCTGGACATCAACC
TGCCCGGCAAGGACGGCTTCAGCGTCATCCGCGAGTTGCGCGCCGCCGGGCTGGAAGCGCCCGTGCTGGTCATGACCGCC
CGTTCCGAAATCGAAGACAAGATCGACATGCTCGACCTGGGCGCCGACGACTATCTCGTCAAGCCCTTCGACCTGCGCGA
ACTCGAAGCGCGGCTGCGCGCCCTGCTGCGGCGCCCGGCCGGGCAGACCAGCAGCGTCACCGCCTACGGCAACCTGAGCC
TGGATCTGGCCAATCGCCACGTCACGCTGGCTGGCGCGCCGCTGGAACTGGGCCGGCGCGAGTTCCGGCTGCTGGAGATC
CTGCTGGGCAAGCTGGGCCAGACCGTGGCCAAGGAACGGCTCATGAACCAGCTGTTCGACCTGGACGACGGTTCCCTCAA
CGCGCTGGAACTGCTGATCTCGCGCCTGCGCAAGAAACTGGCCGGCGCCTCCATCGATATCGTCACCGTGCGCGGCGTCG
GCTACCAGGCCCGCAGCCATGACCCTGCCTGA

Protein sequence : 
MRILLVEDNLDLGDAVESKLRSAGHSVQWVRDGVAALRWGLDETWDALVLDINLPGKDGFSVIRELRAAGLEAPVLVMTA
RSEIEDKIDMLDLGADDYLVKPFDLRELEARLRALLRRPAGQTSSVTAYGNLSLDLANRHVTLAGAPLELGRREFRLLEI
LLGKLGQTVAKERLMNQLFDLDDGSLNALELLISRLRKKLAGASIDIVTVRGVGYQARSHDPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-18 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NH44784_015541 YP_008028648.1 Tricarboxylate transport transcriptional regulator TctD NC_002516.2.879194.p Protein 4e-22 45
NH44784_015541 YP_008028648.1 Tricarboxylate transport transcriptional regulator TctD BAC0487 Protein 4e-14 43
NH44784_015541 YP_008028648.1 Tricarboxylate transport transcriptional regulator TctD BAC0083 Protein 4e-20 41
NH44784_015541 YP_008028648.1 Tricarboxylate transport transcriptional regulator TctD BAC0197 Protein 3e-19 41