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Name : NH44784_014511 (NH44784_014511) Accession : YP_008028546.1 Strain : Achromobacter xylosoxidans NH44784-1996 Genome accession: NC_021285 Putative virulence/resistance : Virulence Product : Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, homologous to flagellar export components Function : - COG functional category : - COG ID : - EC number : - Position : 1535534 - 1536604 bp Length : 1071 bp Strand : - Note : - DNA sequence : ATGGCGGGCGCCATGAGCGGCGAAAAGACCGAACAGCCCACCCAAAAGAAACTGCGCGACGCGCGCCAGAAAGGCGATGT CGCGCACAGCAAGGACTTCACCCAGACACTGCTGGTGCTGGCGTTGTTCGGCTACCTGCTGGGCAACGCCCATGGCATCG TCGAGGCGCTGGGGCGGCTGGTCCTGATCCCGTCCACGCTGGTGGGACAGTCTTTCGAACAAGCGCTGCCAATCGCACTG GACGCGGCCCTGCGCGAAGCGGTCTACCTGGTGCTGCCGTTCGTGCTGATCGTGCTGGTGGTGGGCATGTTCTCCGAATT CCTGCAGGTGGGCGTGGTGCTGGCGTTCGAGAAGCTGAAGCCGTCGGCCAAGAAGCTCAACGTGATGAGCAACCTGAAGA ACATCTTCTCGAAGAAGAACCTCGTGGAACTGCTCAAGTCCATCATCAAGATCGCCTTCCTGTCGGTGCTGGTGACGCTG GTGGTGCGTGACGCGCTGCCGGAATTGATGGCGGTGCCGCACAGCGGCCTGGCCGGCCTGGAAGCGGGCGTGGGCGGCAT GATGCGCGCGCTGATCGTGAACATCGCCGTGGCCTATGTGGTGATTTCCCTGGCCGATTTCGTCTGGCAGCGCATGCAGT ACCGCAAGGGGCTGATGATGAGCAAGGAAGACATCAAGCAGGAATTCAAGGAGATGGAGGGCGATCCCCACATCAAGCAC AAGCGCAAGCACCTGCACCAGGAAATGGTGATGCACGGCGCGGTTGCCAGCACGCGCAAGGCCTCGGTGCTGGTGACCAA CCCCACCCACCTGGCGGTGGCCATCTACTACGAGCCCGACGAGACGCCGCTGCCGGTGGTGCTGGCCAAGGGCGAGGGCG CGCTGGCCGAGCAGATGATGCGGGCGGCGCGCGAAGCCGGTGTGCCGGTGATGCAGAACATTCCCCTGGCGCGCGCGTTG ATGGCGTCCGCGCTGCCAGACCAATACATTCCCAGTGAACTGATCGAGCCGGTCGCCGAAGTCCTGCGACTCGTCAGGAA GCTGGCCGGCAATGCGGACGATCCGACATGA Protein sequence : MAGAMSGEKTEQPTQKKLRDARQKGDVAHSKDFTQTLLVLALFGYLLGNAHGIVEALGRLVLIPSTLVGQSFEQALPIAL DAALREAVYLVLPFVLIVLVVGMFSEFLQVGVVLAFEKLKPSAKKLNVMSNLKNIFSKKNLVELLKSIIKIAFLSVLVTL VVRDALPELMAVPHSGLAGLEAGVGGMMRALIVNIAVAYVVISLADFVWQRMQYRKGLMMSKEDIKQEFKEMEGDPHIKH KRKHLHQEMVMHGAVASTRKASVLVTNPTHLAVAIYYEPDETPLPVVLAKGEGALAEQMMRAAREAGVPVMQNIPLARAL MASALPDQYIPSELIEPVAEVLRLVRKLAGNADDPT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscU | AAO18037.1 | LscU | Virulence | TTSS locus | Protein | 3e-58 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| NH44784_014511 | YP_008028546.1 | Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, homologous to flagellar export components | VFG0041 | Protein | 1e-99 | 65 |
| NH44784_014511 | YP_008028546.1 | Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, homologous to flagellar export components | VFG0185 | Protein | 4e-51 | 46 |
| NH44784_014511 | YP_008028546.1 | Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, homologous to flagellar export components | VFG0397 | Protein | 3e-56 | 45 |
