Gene Information

Name : NH44784_010641 (NH44784_010641)
Accession : YP_008028164.1
Strain : Achromobacter xylosoxidans NH44784-1996
Genome accession: NC_021285
Putative virulence/resistance : Unknown
Product : Superfamily II DNA/RNA helicases, SNF2 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1126345 - 1128624 bp
Length : 2280 bp
Strand : -
Note : -

DNA sequence :
ATGTCCCTCGATCTCGAAAACACTACCGCCGAAGCCACGCCCGTACAGGGCGAACTGCTCGACGCGGAATCCAACCCTCT
GACCCTGAGCCTTCAGGATTTTGTCGGCGAGTTCGGCGACGAACTGCTCGACGCCCTCAACAGCGCCAATCCGCCGGTCT
ATACCGGCCAGCCGCAGGCGCATCGTCAACTCGTCGTCGCCAGCCTCAAACGCAAGCTATTCCAAGCCCAAGCCGAAGTC
GTCCATGCCGCCGCCGAGCTGCTGATCGACCGTGGCGAACACGCCGCGATCGTCAACGGCGAGATGGGTTGCGGCAAAAC
GACCGTTGGTATCGCCACAGCCGCCGTGCTCAACGCCGAAGGCTATCGCCGTACCCTGGTTCTTTCTCCACCGCACCTGG
TCTACAAGTGGCGGCGCGAGATCCAGGAGACGGTGGCAGGCGCCAAGGTCTGGGTGCTCAACGGCCCGGACACGCTGGTC
AAGCTCATCAAGCTGCGCGAGCAGTTGGGTGTGCAGCCCACGGGCCAGGAGTTCTTTGTCCTGGGGCGCGTCAGGATGCG
GATGGGATTCCACTGGAAGCCTGTCTTCACCACGCGGCGCACCCGCCATGGCGACGTGGCAGCGTGCCCTGACTGCGGCA
CGGTCATCACCGACCTCGACGGCGAGCCGGTCAACCCGGTCGCGCTCGAAGCCGAGGAGTACCGCAGGAAGTGCAGCCAT
TGCGCCGCGCCCCTGTGGACATTGATCCGCCCGCGCAGCCTGTCCGGCAGCGACCAGTCCTCGGCCGTGCTGAAAGCGTT
GAAGCGCATCCCGACGATCGGGGAAGTCACCGCGCAGAAGCTGATGCAGAAGTTCGGCGACGGGTTCCTGGCGTCGATGC
TGGGCGACAACATCCATGAGTTCATCAACCTCATGGACGGCAACGGCGAGCTGGTGTTTTCCGACCGTCAAGCCACGCGC
ATGGAACGTGCGATGGCCAACATGGAGTTCGGTTTTGGCGAGGGCGGCTATCAACCGTCCGAGTTCATCAAGCGCTACCT
GCCGCAAGGCACGTTCGACCTGCTCATCGCCGACGAGGCCCACGAGTACAAGAACGGCGGCAGCGCCCAGGGCCAGGCCA
TGGGCGTGCTGGCGGCGAAGGCTCGCAAGACCTTACTGCTGACCGGCACGTTGATGGGCGGCTACGGCGACGATCTGTTC
TACCTGCTGTTCCGAGCCCTTCCCGGGCGGATGATCGAAGACGGCTATCGCCCGACCACGAGCGGCAGCATGACCTCGGC
CGCGATGGCGTTCATGCGCGATCACGGTGTCCTGAAGGACATTTATTCCGAGAGCACCGGGACGGCGCACAAGACCGCGA
AAGGCACGAAAGTCAGTGTCAGAACGGTCAAAGCTCCGGGCTTCGGCCCCAAGGGCGTGCTGCGCTGCATCCTGCCGTTC
ACGATCTTCCTCAAACTCAGAGACATCGGCGGCAACGTTCTGCCACCGTATGACGAGGAGTTCCGTGAAGTCGCGATGGA
CACGGCGCAAGCCGCGGCCTACCGCGATTTGGCGGGTCGGCTGACCGCGGAGCTGAAACAGGCTCTGGCGCGACGCGATA
CAACCTTGCTGGGTGTGGTCCTCAACGTGCTGCTGGCCTGGCCGGACTGCTGCTTCCGGTCGGAGACCGTGGTGCATCCG
CGCACACGCAATACCTTGGCGTTCGTCCCGGCTCAGTTCAACGAGTTCGAGATCAGCCCCAAGGAGCGTGAGCTGATCGA
CATCTGCAGGGAAGAGAAAGCACAGGGCCGCAAGGTTCTGGCCTACACGGTCTATACCGGCACGCGCGACACGACTAGCC
GGTTGAAGGTATTGCTGGAGCAGGAAGGCTTCAAAGTGGCGGTACTGCGCGCAAGCGTGGATGCCAGCCGCCGCGAGGAC
TGGATCGCCGAGCAGTTGGACCGTGGCATCGACGTGCTCATCACCAATCCCGAGCTTGTCAAGACGGGATTGGACCTGTT
GGAGTTTCCGACGATCGTGTTCATGCAGTCGGGCTACAACGTGTATTCGCTCCAGCAGGCGGCACGCCGCTCTTGGCGTA
TCGGGCAGAAGCTGTCCGTGCGCGTGATCTACCTGGGCTACGCCGGCTCCTCGCAGATGACCTGCCTGGAGCTGATGGCC
AAGAAGATCATGGTCTCGCAGTCCACTTCGGGCGATGTACCCGAATCGGGGCTCGATGTCCTGAACCAGGATGGTGATTC
CGTCGAGGTCGCATTGGCCCGGCAATTGGTAACTGCGTGA

Protein sequence :
MSLDLENTTAEATPVQGELLDAESNPLTLSLQDFVGEFGDELLDALNSANPPVYTGQPQAHRQLVVASLKRKLFQAQAEV
VHAAAELLIDRGEHAAIVNGEMGCGKTTVGIATAAVLNAEGYRRTLVLSPPHLVYKWRREIQETVAGAKVWVLNGPDTLV
KLIKLREQLGVQPTGQEFFVLGRVRMRMGFHWKPVFTTRRTRHGDVAACPDCGTVITDLDGEPVNPVALEAEEYRRKCSH
CAAPLWTLIRPRSLSGSDQSSAVLKALKRIPTIGEVTAQKLMQKFGDGFLASMLGDNIHEFINLMDGNGELVFSDRQATR
MERAMANMEFGFGEGGYQPSEFIKRYLPQGTFDLLIADEAHEYKNGGSAQGQAMGVLAAKARKTLLLTGTLMGGYGDDLF
YLLFRALPGRMIEDGYRPTTSGSMTSAAMAFMRDHGVLKDIYSESTGTAHKTAKGTKVSVRTVKAPGFGPKGVLRCILPF
TIFLKLRDIGGNVLPPYDEEFREVAMDTAQAAAYRDLAGRLTAELKQALARRDTTLLGVVLNVLLAWPDCCFRSETVVHP
RTRNTLAFVPAQFNEFEISPKERELIDICREEKAQGRKVLAYTVYTGTRDTTSRLKVLLEQEGFKVAVLRASVDASRRED
WIAEQLDRGIDVLITNPELVKTGLDLLEFPTIVFMQSGYNVYSLQQAARRSWRIGQKLSVRVIYLGYAGSSQMTCLELMA
KKIMVSQSTSGDVPESGLDVLNQDGDSVEVALARQLVTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C71 AAN62165.1 conserved hypothetical plasmid protein Not tested PAGI-2(C) Protein 0.0 98
ORF SG81 AAN62302.1 conserved hypothetical plasmid protein Not tested PAGI-3(SG) Protein 0.0 89
RL063 AAP84188.1 plasmid related protein Not tested PAPI-1 Protein 0.0 72
unnamed ABR13404.1 putative helicase Not tested PAGI-5 Protein 0.0 72
pph67 CAI36108.1 superfamily II DNA/RNA helicase Not tested PPHGI-1 Protein 0.0 70
yea AAW83099.1 Yea Not tested GGI Protein 6e-173 51