Gene Information

Name : NH44784_010501 (NH44784_010501)
Accession : YP_008028150.1
Strain : Achromobacter xylosoxidans NH44784-1996
Genome accession: NC_021285
Putative virulence/resistance : Unknown
Product : Candidate type III effector Hop protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1109355 - 1109735 bp
Length : 381 bp
Strand : -
Note : -

DNA sequence :
ATGTTGGCTCCGATCTGGCTGCGCGCCGCGCATCGCGGCGTGCCCACTTTTCTCGTGACGGCCCTCCTGCTGGGCCAGTC
CCCGATGGCGTTGGCCGAGCCCCCCACGCAGCGCCAGGAACTGGTCGCGGCGCTGCGCCAGCTCGACGCGCTGGAGCGCA
CCGTCGCCGACAGCGCCGCGCATGCCCCCATCCAGCCGGGAGAGCGCTACCACTTCGATTACCCGCGGCTGCTGGCTGAC
CTAGCGCGCGTGCGCGCCGGTATCCAGGCCCACCTCTCACCTTCGCGTGCCCAGCCGCGCGACCCCTCCGAACTGGCCGG
CGACTACCGCACTGAGCGGGCCGTCGAGCCATCGCCGACGACCGCGGAGGTCAAGCCATGA

Protein sequence :
MLAPIWLRAAHRGVPTFLVTALLLGQSPMALAEPPTQRQELVAALRQLDALERTVADSAAHAPIQPGERYHFDYPRLLAD
LARVRAGIQAHLSPSRAQPRDPSELAGDYRTERAVEPSPTTAEVKP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C55 AAN62149.1 hypothetical protein Not tested PAGI-2(C) Protein 8e-48 91
EXA41 ABD94650.1 conserved hypothetical protein Not tested ExoU island A Protein 1e-16 46
unnamed ABR13370.1 hypothetical protein Not tested PAGI-5 Protein 5e-17 46
RL030 AAP84157.1 candidate type III effector Hop protein Not tested PAPI-1 Protein 4e-17 46
pph76 CAI36117.1 candidate type III effector Hop protein Not tested PPHGI-1 Protein 5e-16 45