Gene Information

Name : SSYRP_v1c00180 (SSYRP_v1c00180)
Accession : YP_008026125.1
Strain : Spiroplasma syrphidicola EA-1
Genome accession: NC_021284
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 24888 - 25817 bp
Length : 930 bp
Strand : +
Note : -

DNA sequence :
ATGAACGAAAAGGAAAAAATGGAACCAACAGCTGAAAAAAAAGCAAAGGTAAATAAAGCCCCTGCTAAAAAAGGGAAAAA
AGAAAAAGTTGATTATACAGTTGTTAAGGAATTTAAAAAGAATTTAAAAGAACAAAAACAACAAACTAAACAATATTCAA
AAAAAATCTTAAAAGGAGAAATTGTTTCAACAACAGGAACAACCCCAAATACAGATAAATACGTAATTGAATTAGTTAAT
GTTAAAAAGGCTTATATTACTGGGGAAGTTGAAACACCAGTTTTAAAAGGAATTGATTTAAGTTTAGAAAAAGGAGACTT
TATTGTTATTTTAGGGCCTTCAGGGTCAGGGAAAACAACCTTGCTGAATGTTATTTCAGGACTAGATAAAGTTAATAGTG
GTGATGTTTTTGTCTTAGGTTATAATTTATCCTTACTAAAAGATGTTGATTTAACAAAATTCCGAAGAGACCATGTTGGG
TTTATTTTCCAACAGTATAATCTTTTAACTAATTTAACAGCAAAAGAAAATGCCGAAGTTGGGGAAAACTTAAGTAAATC
AAAAGAAAAAGATTTAACAATTAACGATATTTTTAAAACAATTGGGATGGAAGAACAAATGAATAAATATCCTCACCAAA
TGTCAGGGGGTCAACAACAACGGGTTTCAATTGCTCGTGCCTTAGCAAAAAACCCTGATATTTTATTCGGGGATGAACCA
ACAGGGGCCTTAGATGAAGAAATGGGGCGTAAAGTGTTGGAAATTTTAGTAGATGTTAATAAAAAATATAAAACAACTGT
TATAATTGTTACTCATAATCCAAATATTGCTGATATTGCTAATACTGTTATTCATGTTAGAAATGGTTTAATTGATCAAA
TTAAAAGAAACGATAAACCAAAAAAACCAAGCGATATTGATTGATCATAA

Protein sequence :
MNEKEKMEPTAEKKAKVNKAPAKKGKKEKVDYTVVKEFKKNLKEQKQQTKQYSKKILKGEIVSTTGTTPNTDKYVIELVN
VKKAYITGEVETPVLKGIDLSLEKGDFIVILGPSGSGKTTLLNVISGLDKVNSGDVFVLGYNLSLLKDVDLTKFRRDHVG
FIFQQYNLLTNLTAKENAEVGENLSKSKEKDLTINDIFKTIGMEEQMNKYPHQMSGGQQQRVSIARALAKNPDILFGDEP
TGALDEEMGRKVLEILVDVNKKYKTTVIIVTHNPNIADIANTVIHVRNGLIDQIKRNDKPKKPSDIDWS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-37 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-37 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSYRP_v1c00180 YP_008026125.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-39 43
SSYRP_v1c00180 YP_008026125.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 1e-42 42