Gene Information

Name : MASS_4700 (MASS_4700)
Accession : YP_008025166.1
Strain : Mycobacterium abscessus 50594
Genome accession: NC_021282
Putative virulence/resistance : Resistance
Product : lipoprotein-releasing system ATP-binding protein LolD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4715660 - 4716376 bp
Length : 717 bp
Strand : -
Note : -

DNA sequence : 
ATGAATAGTCCTGAAAAGCCGGAGGTTCCGCCGGAGCCGGTCCTGCAACTGAAAGGTGTTGCGCATCAGTACGGAACCGG
CGCTGCGGCGGTGCACGCGCTGAGTGGCTTGGACCTAACAGTCAATACCGGTGAGGTGGTGCTTGTTGTCGGTCCCTCCG
GTGGCGGCAAGACCACGGCATTACTCGTCATGGGCCTACTGCTGACTCCAGCCTCGGGGCTGGTCAGGATCGGGGGCCGG
GATGTGGGTGAGCTCGCGGAGCGAGAACGCGCACACATCAGGCTGGAGAAACTGGGATTTCTGTTCCAGGAATACAACCT
GTTGAACGCGTTGACGAGTGCGGAGAATGTGGCCCTGCCGTTGCGTTACGCCGGGGTGAGTAAGAACAAAGCCATGTCAC
GTGCGCGGGGCTTGCTGGCCGACCTTGGGCTGGAGCATCGGACCGATCACCGTCCACCGGCGCTCTCGGGCGGTGAGAAG
CAACGTGTTGCCGCCGCACGGGCGCTGGTGGCCCGTCCGGGCCTGGTCCTTGCCGACGAACCGACCGCGAATCTGGATTC
GGCCACCGGCAAGAGGGTTGCCGCGCAGCTCGCGGACGCGGCCCGAAGCCAAGGGGCGGCGGTGGTGATCGTGACCCACG
ATCTACGCCTTACCGATATCGCGGATCGAGTACTGCATCTGGAAGATGGCGTGCTGCTGGAGAAAGAGAACCAATGA

Protein sequence : 
MNSPEKPEVPPEPVLQLKGVAHQYGTGAAAVHALSGLDLTVNTGEVVLVVGPSGGGKTTALLVMGLLLTPASGLVRIGGR
DVGELAERERAHIRLEKLGFLFQEYNLLNALTSAENVALPLRYAGVSKNKAMSRARGLLADLGLEHRTDHRPPALSGGEK
QRVAAARALVARPGLVLADEPTANLDSATGKRVAAQLADAARSQGAAVVIVTHDLRLTDIADRVLHLEDGVLLEKENQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-23 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-25 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-25 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MASS_4700 YP_008025166.1 lipoprotein-releasing system ATP-binding protein LolD NC_008702.1.4606598. Protein 2e-32 46
MASS_4700 YP_008025166.1 lipoprotein-releasing system ATP-binding protein LolD NC_012469.1.7686878. Protein 6e-32 42
MASS_4700 YP_008025166.1 lipoprotein-releasing system ATP-binding protein LolD CP001581.1.gene798.p Protein 3e-29 41