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Name : MASS_0437 (MASS_0437) Accession : YP_008020903.1 Strain : Mycobacterium abscessus 50594 Genome accession: NC_021282 Putative virulence/resistance : Unknown Product : putative oligopeptide ABC transporter, ATP-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 483305 - 484954 bp Length : 1650 bp Strand : + Note : - DNA sequence : GTGGAGGTGCCCACAAGTGATTCCGTGGTCGACATCACGGGCCTGACTGTCGATTTCGAGGTGGACAAGCAGTGGGTTCC GGCCGTCAAGGGTGTCTCGTTGTCGGTCGCCAAGGGTGAGGTGCTGGCGATCGTCGGTGAATCCGGATCGGGGAAATCGA CTACCGCCATGGCCATCCCGGCCTTGTTGCCGCCCAGCGCGCGCGTTCGCGGCAGCGTGAAGCTCAACGGTGCCGAGCTG CTCGGAGCCACCAACGACGAGTTGCGCGCTGTGCGCGGCAAGGACGTCGCCGTCATCTTCCAGGAGCCGATGACGGCACT GAATCCGGTGTACACCATCGGTTGGCAGATCGCCGAAGCCGTTTGTGCGCATAAGAAGATGTCGCGCAGGCAGGCGCGCG ACCGGGCCGTTGAATTGCTTGAGCTGGTCGACATGCCCGAGCCGGCTAAGCGGGTCAAGCATTACCCGCACCAGCTTTCC GGCGGGCAGCGGCAGCGTGCCATGATTGCGCAGGCTCTCGCGTTGGATCCCGGGCTGCTCATCGCCGATGAGCCGACCAC CGCCCTCGATGTGACCGTGCAGGCCGAAATACTGGATCTCATGCGTGATCTGCGCCATCGTATCGACGCCGGCATCATCC TGATCACCCACGATATGGGCGTGGTGGCCGATATGGCCGACCGGATCATGGTGATGAAGGACGGTGAGGTCGTTGAGCAG GGTGATGCCGAGGGTATTTTCCATCGGGCTCAGCAGCCGTACACCCGGCAGCTGCTGGCCTCGGTGCCGCACCTGGGCGC CACCTTGCATGGTCGCGACGAAAGCAACCCACCACCAACAGATCTAGCGCTGAGTGTGGAACATGCGGTCATCGAATATC CGGGAAAGAGTGGGAGCTTCCGGGCTGTCGACGATGTGTCGTTCACCATCGGCAGGGGTGAGGTCGTGGGCCTCGTTGGT GAGTCAGGGTCCGGAAAGTCCACTATCGGCCGGGCGGCGGTAGGTCTACTGAAGGTGACATCTGGAACTATTTGTGTTGC TGGACAGGATATTTCGACCGCCAATCGCAAGCAGCTGCGAGATATCCGGAGCAAGGTGGGGGTGGTCTTCCAGGATCCCG GATCCTCGCTGAACCCGCGATGGCCGATCGGCCAGTCGATTGCCGAACCATTGACTCTGCACACCGATATGGATCGCACC CAGCGGGAGAGCAGGGTCAAGACGTTGTTGGAGCAGGTGCAGTTGCCGGCCGCCATGCGAAACCGCTTCCCCCATCAGCT CTCGGGTGGGCAGCGCCAGCGTGTCGGCATCGCGCGGGCGCTGGCGCTGGAGCCAACGCTGTTGATCGCGGACGAGCCGA CCTCCGCGCTGGATGTATCGGTGCAGGCGACGGTGCTCGACTTGTTCGCCGAGCTGCAGCGCGAGCACGGGTTCGCCTGC CTGTTCATAAGTCACGACCTGGCGGTAGTCGAGCTGGTGGCGAGCCGTATCGCAGTGCTCAACCGCGGCCGGCTTGCCGA ATTCGGCTCGGATGCACAGGTATTGACCGCGCCCAAGGACGACTACACCAAGCGCCTGTTGGCGGCCGTGCCAGTGCCGG ACCCAGAACAGCAGCGGATCCGGCGCGAGGAGCGTCAGGCACTGCGCTGA Protein sequence : MEVPTSDSVVDITGLTVDFEVDKQWVPAVKGVSLSVAKGEVLAIVGESGSGKSTTAMAIPALLPPSARVRGSVKLNGAEL LGATNDELRAVRGKDVAVIFQEPMTALNPVYTIGWQIAEAVCAHKKMSRRQARDRAVELLELVDMPEPAKRVKHYPHQLS GGQRQRAMIAQALALDPGLLIADEPTTALDVTVQAEILDLMRDLRHRIDAGIILITHDMGVVADMADRIMVMKDGEVVEQ GDAEGIFHRAQQPYTRQLLASVPHLGATLHGRDESNPPPTDLALSVEHAVIEYPGKSGSFRAVDDVSFTIGRGEVVGLVG ESGSGKSTIGRAAVGLLKVTSGTICVAGQDISTANRKQLRDIRSKVGVVFQDPGSSLNPRWPIGQSIAEPLTLHTDMDRT QRESRVKTLLEQVQLPAAMRNRFPHQLSGGQRQRVGIARALALEPTLLIADEPTSALDVSVQATVLDLFAELQREHGFAC LFISHDLAVVELVASRIAVLNRGRLAEFGSDAQVLTAPKDDYTKRLLAAVPVPDPEQQRIRREERQALR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 3e-78 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-78 | 43 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-78 | 43 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-78 | 43 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 2e-97 | 41 |
