Gene Information

Name : MASS_4391 (MASS_4391)
Accession : YP_008024857.1
Strain : Mycobacterium abscessus 50594
Genome accession: NC_021282
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4406745 - 4407707 bp
Length : 963 bp
Strand : -
Note : -

DNA sequence :
CTGATTTGTGCGTTCATCGCCGAGCATCGAGCTCGGTTCGGGGTCGCTCCGATCTGCCGCGTGCTCACCGAGCACGGTGT
CACGATCGCCCCGAGAACCTTCTACGCCTGGCTGTCGAGACCCCCGTCAGCGCGGGCCCTGTGGGACACCGTCATCACCG
AGGTGCTGGCCGGCTTCTACGAGCCCGACGAGCACGGCCGCCGCAAGCCGGAGTCGTTGTACGGTGCCACCAAAATGTGG
GCTCATCTGCAACGCCAGGGCATCGCGGTGGCCCGTTGCACCGTGGAGCGCCTCATGCGAGCCAACGGCTGGCGCGGGGT
CACCCGTCGCAAGAAGGTCCGCACCACCGTGGCGGATCCGGCCGCGGCACGGGCAGCCGATCTGGTCAAACGACAGTTCC
GGGTGCCCGCACCCAACGTGCTGCTGGTAGCGGACTTCACCTACGTCCGCCTGGCCAGCGGGGCGTTTGTCTACACCGCG
TTCGCCGTCGATGCCTACGCGGGCCGGATCGTGGGCTGGACCTGCTCAGCCAGCAAGGAAGACCGGTTCGTCCGCCAGGC
GATCCGCCATGCCTCACAACTCCGCGAAAATGAAGGTAATCCCTTGTTGGGCAACACTATTCATCACAGCGATGCGGGAT
CGCAATACACCTCGGTGAGGTTCGGCGAAACCCTCGCGCTGTCCGGGCTGGTGGCCTCCATCGGCACAGTCGGGGATGCC
TTCGATAACGCCCTGGCCGAAACGACCATCGGGCTGTACAAGACCGAAGCTGTCCGCGACGACTCACCGTTCCGGCGCGG
CCCCCTGCACCGCCTGACCGACGTCGAACTGCTCACCGCCGACTGGGTCCACTGGTACAACACCGACCGGCTCATGCACC
GCCTGGGCCGCATCCCACCCATCGAATACGAGACCGTCCACTACGCTACAAACACAGCCCAACCAGAGGCTGCACACCAA
TAA

Protein sequence :
MICAFIAEHRARFGVAPICRVLTEHGVTIAPRTFYAWLSRPPSARALWDTVITEVLAGFYEPDEHGRRKPESLYGATKMW
AHLQRQGIAVARCTVERLMRANGWRGVTRRKKVRTTVADPAAARAADLVKRQFRVPAPNVLLVADFTYVRLASGAFVYTA
FAVDAYAGRIVGWTCSASKEDRFVRQAIRHASQLRENEGNPLLGNTIHHSDAGSQYTSVRFGETLALSGLVASIGTVGDA
FDNALAETTIGLYKTEAVRDDSPFRRGPLHRLTDVELLTADWVHWYNTDRLMHRLGRIPPIEYETVHYATNTAQPEAAHQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 5e-30 47
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 3e-30 47
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 2e-35 47
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 4e-37 42
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 2e-36 42
Z1198 NP_286733.1 transposase Not tested TAI Protein 1e-36 42
Z1638 NP_287141.1 transposase Not tested TAI Protein 1e-36 42
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 5e-36 42
Z1221 NP_286756.1 transposase Not tested TAI Protein 1e-36 42
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 4e-36 42
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 1e-36 42
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 4e-36 42
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 4e-36 42
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 7e-37 42
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 2e-36 42
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 5e-37 42
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 1e-36 42
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 1e-36 42
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 4e-37 42
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 6e-21 41
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 2e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MASS_4391 YP_008024857.1 transposase VFG1602 Protein 9e-34 41