Gene Information

Name : MASS_0401 (MASS_0401)
Accession : YP_008020867.1
Strain : Mycobacterium abscessus 50594
Genome accession: NC_021282
Putative virulence/resistance : Virulence
Product : resolvase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 437014 - 437568 bp
Length : 555 bp
Strand : +
Note : -

DNA sequence :
ATGCTGATCGGGTACGCCCGAGTCTCGACCGTCGAGCAGAGCACGGGGCTCCAGCTCGACGCACTCCACGCAGCTCGCGT
CGAGCAGGTGTTCACGGACGAGGGCGTCTCGGGCTCCGTGTCTTCTCGTCCTGAACTCGACAAGTGTCTTGCCCACCTGC
GTTCTGGTGACACCTTGGTCGTGTGGAGACTCGACCGTTTGGCCAGGTCGCTCAAGAACCTCTTGGAGCTGGTGGAGTCT
CTGTCCCAGAGGGGAATTCACTTGCGCTCCCTCACTGAGGCTATCGACACCAGCTCGGCCAGTGGGCGGCTCGTGTTGAG
CGTGTTCGGGGCACTGGCTGAGTTTGAGAGAAGCCTCATTATCGAACGCACCCAGGCTGGCTTGGCGGCAGCTCGGGCGC
GGGGAGCCCGTATCGGGCGACCGACAGCCATGACGACGGGCCAAATCGAGCAAGCCAAGACATTGGTCGGCGCGGGGCAT
CGAGTGGGTGATGTGGCTCGAACACTGGGTGTGGGACGCTCCACGCTGTATCGCGTTCTGGGGGAGGTGAATTGA

Protein sequence :
MLIGYARVSTVEQSTGLQLDALHAARVEQVFTDEGVSGSVSSRPELDKCLAHLRSGDTLVVWRLDRLARSLKNLLELVES
LSQRGIHLRSLTEAIDTSSASGRLVLSVFGALAEFERSLIIERTQAGLAAARARGARIGRPTAMTTGQIEQAKTLVGAGH
RVGDVARTLGVGRSTLYRVLGEVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
res AGF34985.1 resolvase Not tested SGI1 Protein 1e-31 54
res AGF35025.1 resolvase Not tested SGI1 Protein 1e-31 54
res AGF35059.1 resolvase Not tested SGI1 Protein 1e-31 54
res AGK06929.1 resolvase Not tested SGI1 Protein 1e-31 54
res AGK06966.1 resolvase Not tested SGI1 Protein 1e-31 54
res AGK07012.1 resolvase Not tested SGI1 Protein 1e-31 54
res AGK07070.1 resolvase Not tested SGI1 Protein 1e-31 54
res AAK02044.1 resolvase Not tested SGI1 Protein 1e-31 54
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 1e-31 54
ABTW07_3871 YP_005797119.1 resolvase IS26 Not tested AbaR4e Protein 4e-29 52
tnpR ACN81015.1 TnpR resolvase Not tested AbaR5 Protein 4e-29 52
1_318 CAJ77076.1 Resolvase Not tested AbaR1 Protein 3e-29 52
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 2e-32 50
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 9e-29 48
SH1761 YP_253676.1 DNA-invertase Not tested ¥ÕSh1 Protein 4e-29 48
binL YP_254524.1 DNA-invertase Not tested ¥ðSh2 Protein 4e-29 48
tnpR ACF06154.1 resolvase Not tested Tn5036-like Protein 1e-24 45
tnpR ACY75537.1 TnpR Not tested Tn6060 Protein 8e-22 42
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 2e-22 41
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 2e-22 41
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 2e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MASS_0401 YP_008020867.1 resolvase VFG1030 Protein 6e-23 41