|
Name : MASS_0346 (MASS_0346) Accession : YP_008020812.1 Strain : Mycobacterium abscessus 50594 Genome accession: NC_021282 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : - COG ID : - EC number : - Position : 377252 - 378715 bp Length : 1464 bp Strand : + Note : - DNA sequence : ATGTCCAACCGCACCACAACGAATACCGGAATCGCGGTCGAGAGTGACGACGAGTCGCTGACCGCGGGTACGCAGGGCCC GGTGTTGCTGCATGACCATTACCTGATCGAGAAGCTTGCCCAGTTCAACCGGGAGCGGGTTCCCGAGCGCATCGTGCACG CCAAGGGCGCCGGGGCATACGGGGAGCTCGTGATCACCGCCGACGTCTCGAAGTACACCAAAGCGAAGTTGTTCCAGCCC GGAGCAAAAACCGAATCTTTGGCTCGCTTTTCGACTGTCGCCGGGGAGCAGGGTAGCCCCGATAGCTGGCGCGATCCGCG CGGATTCGCGGTCAAGTTCTACACCGAAGACGGCAACTACGATCTCGTCGGCAACAACACTCCGGTGTTTTTCATCCGCG ATGCCATTAAATTCCCGGACTTCATCCGATCGCAGAAACGGCTGCCCGGTTCCGGGTTGCGTGACCACAACATGCAGTGG GATTTCTGGACGCTACGCCCCGAGACTGCGCACCAGGTCACCTGGCTGATGGGGGATCGCGGCATTCCGAAGACGTATCG GCACATGAACGGCTACGGCTCGCACACCTACCAGTGGATCAATGCCGAGGGCGAGCGCTTCTGGGTCAAATACCACTTCA AGACGGACCAGGGCCATGATTTCCTCACGCAGCAAGAAGCGGATGAGCTTGCGGGCTCGGACGCCGACGCCCATCGCCGC GATCTGTGGAATGCGATCGAGGAAGGCAACTTCCCGAGCTGGACCCTGCACGTACAGATCATGCCGGTGGACGAAGCGGC GGGATATCGGTTCAATCCCTTTGATCTGACCAAGGTTTGGTCAAAGAAGGACTACCCGCTGATCGAGGTCGGCAAGTGGA CGCTCAACCGCAACCCGCGCAACTACTTCGTGGAAATTGAGCAGGCGGCGTTCGAGCCTTCGAATATCGTGCCCGGAATC GGTTTTTCGCCGGACAAGATGCTGTTGGGCCGCGTGTTCGCCTATGCGGACGCACATCGATACCGCATCGGCACCAACTA TGCCCAGCTACCGCCGAACGCGCCGCGCGCCGCAACGGTGAACTCCTACTCCAAGGAGGGGCCGATGCGCTACCACTTCA ACGATCCGGAAATTCCCGTCTACGCGCCCAATTCCTTTGGCGGCCCGCACGCCGATCCAGAAGCCGCCGGTGACGGCGGC GTCTGGGAGTTCGACGGTACGGCAGTGCGCGCCGGGTACGTCCAGCATGCGGAGGACGGCGACTTCGTGCAGGCGGGAAC GTTGGTGCGTGACGTGCTCGACGACGAGCAGCGTGCGCGACTGGCGGGCAATATCGTCGGACACGTGTTGGACGGAGTCT CCGAGCCCGTGTTGTCCAGGGTCTTCGAGTACTGGAAGAACGTGGACCCCGAGCTGGGTAAGGCGGTTGAAGAGGGAGTT CGCGCAGGTCTGGACGCCACGTAG Protein sequence : MSNRTTTNTGIAVESDDESLTAGTQGPVLLHDHYLIEKLAQFNRERVPERIVHAKGAGAYGELVITADVSKYTKAKLFQP GAKTESLARFSTVAGEQGSPDSWRDPRGFAVKFYTEDGNYDLVGNNTPVFFIRDAIKFPDFIRSQKRLPGSGLRDHNMQW DFWTLRPETAHQVTWLMGDRGIPKTYRHMNGYGSHTYQWINAEGERFWVKYHFKTDQGHDFLTQQEADELAGSDADAHRR DLWNAIEEGNFPSWTLHVQIMPVDEAAGYRFNPFDLTKVWSKKDYPLIEVGKWTLNRNPRNYFVEIEQAAFEPSNIVPGI GFSPDKMLLGRVFAYADAHRYRIGTNYAQLPPNAPRAATVNSYSKEGPMRYHFNDPEIPVYAPNSFGGPHADPEAAGDGG VWEFDGTAVRAGYVQHAEDGDFVQAGTLVRDVLDDEQRARLAGNIVGHVLDGVSEPVLSRVFEYWKNVDPELGKAVEEGV RAGLDAT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 4e-134 | 60 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 9e-131 | 59 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 9e-131 | 59 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 9e-131 | 59 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 9e-131 | 59 |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 5e-107 | 50 |
