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Name : MASS_2918 (MASS_2918) Accession : YP_008023384.1 Strain : Mycobacterium abscessus 50594 Genome accession: NC_021282 Putative virulence/resistance : Resistance Product : chloramphenicol resistance protein Function : - COG functional category : - COG ID : - EC number : - Position : 2978493 - 2979671 bp Length : 1179 bp Strand : - Note : - DNA sequence : GTGACACTGCCTATCTACGCGCTCACCTTGGCCATATTCGCCCAGGGCTGTTCGGAATTCATGTTCGCTGGGCTCATCAC CGAGGTGGGTGACGACTTTGGTGTCTCGCTGGCTGCGGCGGGAACGCTGACGTCAGCCTTCGCCGTTGGCATCATCGTCG GTGCTCCACTGATGGCTCTTATCGGTGGTCGTTGGCCCCGGCGCCGGGCGCTCGTGTTGTTCTTATCGGTCTTTATCGCA GCGCACATCGTGGGCGCGACGGCCGCGAGCTTTCCGTTGCTGTTGATCGTTCGTGTGGTTTCGGCAGTCGCTAACGCCGG GTTCCTGGCAGTGGCGCTGACGACAGCGATGTCCATTGCGGGTCCACGCGCGAAAGGGCGCACCACAGCGTTGCTGCTCA GTGGCATAACAATCGCCTGTGTCGCAGGAGTACCCGGCGGCGCGGCGCTCGGCTACTTCTGGGGATGGCGTGCGGCGTTG TGGGCGGTGGTGCTGGTATCGGTGCCGGCGCTCGCGGCGATCATGTACGCACTACCGGCCGGACGGCCGGTGACCGGCTT ACCGTCCGCAATTGGTGAATTGCGGACGCTTCGGAGCCGGCGGTTGCAGACAACGCTGGCCGCGGGAGTTCTGTGCAACG CAGCAACCTTTTGTGCCTTTACCTATCTGGCTCCCGTCTCGGTGCAGGTCACCTCGTTGAGTCCGGCGTGGACTCCGGCA CTCCTGGCACTCTTTGGGTGCGGCTCGTTTGTCGGCGTCCACGCCACGGGCAGACTCGCCGACTCACACGCCAACCTGGT AGCCGGCGGGGGCGGAGTGTTGCTGCTGGCGGGCTGGATCGCGTTCGCGGGCACGGCGGCTCACGACTGGCTTTTCGTCA CGCTCGTATTCGCACTGGGCGCGTTGTCGTTCGGCGTCGGCTCGACCCTGTTTTCGCAGGGGCTGTACGCCGCGAGTGAC GCGCCCATGCTGGGCAGCTCGCTCACCACCGCTGCCTTCAACGTCGGCACCGTCATCGGCCCGTCGCTGGGAGGGGCGTC GATACACACCGCGCTGGGCTACCGAGGACCGCTATGGGTCAGTGTGATGTTGGCGGCGCTGGCGCTCGTGGTCACGCTGT GCGGGCTGCAGGCACGACGCCGAACAAGGACGGCTGCAACGTCAGCGAGATCGCGTTGA Protein sequence : MTLPIYALTLAIFAQGCSEFMFAGLITEVGDDFGVSLAAAGTLTSAFAVGIIVGAPLMALIGGRWPRRRALVLFLSVFIA AHIVGATAASFPLLLIVRVVSAVANAGFLAVALTTAMSIAGPRAKGRTTALLLSGITIACVAGVPGGAALGYFWGWRAAL WAVVLVSVPALAAIMYALPAGRPVTGLPSAIGELRTLRSRRLQTTLAAGVLCNAATFCAFTYLAPVSVQVTSLSPAWTPA LLALFGCGSFVGVHATGRLADSHANLVAGGGGVLLLAGWIAFAGTAAHDWLFVTLVFALGALSFGVGSTLFSQGLYAASD APMLGSSLTTAAFNVGTVIGPSLGGASIHTALGYRGPLWVSVMLAALALVVTLCGLQARRRTRTAATSARSR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cmx | YP_005160007.1 | chloramphenicol exporter | Not tested | Not named | Protein | 5e-53 | 47 |
| cmx2 | YP_001800935.1 | chloramphenicol exporter | Not tested | Not named | Protein | 5e-53 | 47 |
