|
Name : MASS_2303 (MASS_2303) Accession : YP_008022769.1 Strain : Mycobacterium abscessus 50594 Genome accession: NC_021282 Putative virulence/resistance : Resistance Product : streptomycin 3''-kinase Function : - COG functional category : - COG ID : - EC number : - Position : 2369290 - 2370069 bp Length : 780 bp Strand : + Note : - DNA sequence : GTGGACGGGCGTTTGATCGATCTGTCGGCCTGGGAGCCGATCGTGACGGGGGAGTCCGGTGCCTCCGTGTACCGCTCGCC CGACGGTTCTCGCTATGCGAAAGAAGGCGGTGCCGATCTTGCGGGCGAGCGGGACCGCATCGAATGGCTTAGTGCTCAAC GTATCCCGGGCCCGTCGGTGCTCGAGTGGGCGACCACGCCGGACGGCCCGCTGCTGATCACCTCGGCGGTACCGGGCGTA CCCGCCGACCAGCTCGACTCCGAGGGTTTGGGCAGGGCATGGTCTGCCATCGCCGCAGCGGTGCGGGACCTGCACGCGCT GCCGACAGCGGGCTGTCCGTTTTCGCGGGAACTGGCCGCCATGGCAACGTTGGCCCGCGACGTCGTGGCCCGCGACGCCG TGAACCCGGATTTCCTGCCCGACGAAGACCGGGCGAGGCCCGCGACCGAGCTGCTATGCCGTGTTGTGGCCGAACTGCCT CAGCGGCTGGGCCAGGAGGCGGGAGACCTGGTGGTGTGCCATGGGGACTTGTGCCTGCCGAATATCGTCATCGCGCCCGG AGACTTCTCGGTGGCAGGTTTCATCGATCTCGGCCGGCTCGGGTTGGCCGACCGGCACGCCGATCTGGCCCTGCTCTTCG CCAATGCCCGGGAGACCTGGCCCGGGGACGGCTGGGTCGCGGCCGCCGCCCACGAGCGGTTCCTGAACCGGTACGGAGCG CCTGCCGACCCCGAACGGTTGGCGTTCTACCTGCGGTTGGATCCGCTGACCTGGGGATAG Protein sequence : MDGRLIDLSAWEPIVTGESGASVYRSPDGSRYAKEGGADLAGERDRIEWLSAQRIPGPSVLEWATTPDGPLLITSAVPGV PADQLDSEGLGRAWSAIAAAVRDLHALPTAGCPFSRELAAMATLARDVVARDAVNPDFLPDEDRARPATELLCRVVAELP QRLGQEAGDLVVCHGDLCLPNIVIAPGDFSVAGFIDLGRLGLADRHADLALLFANARETWPGDGWVAAAAHERFLNRYGA PADPERLAFYLRLDPLTWG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| strA | YP_005176180.1 | aminoglycoside 3''-phosphotransferase protein | Not tested | ICEPmu1 | Protein | 1e-52 | 48 |
| strA | AFV48000.1 | streptomycin (3') phosphotransferase StrA | Not tested | delta-AbaR25 | Protein | 1e-53 | 48 |
| strA | AEQ20909.1 | StrA, APH(3')-Ib streptomycin(3') phosphotransferase | Not tested | Tn6166 | Protein | 1e-53 | 48 |
| strA | AEZ06049.1 | StrA, APH(3')-Ib, streptomycin(3') phosphotransferase | Not tested | Tn6167 | Protein | 1e-53 | 48 |
| strA | ACK44539.1 | StrA | Not tested | SGI1 | Protein | 1e-53 | 48 |
| strA | AEA34675.1 | aminoglycoside phosphotransferase | Not tested | Not named | Protein | 1e-53 | 48 |
| strA | AFH57207.1 | streptomycin resistance protein | Not tested | AbaR4a | Protein | 1e-53 | 48 |
| strA | AGK07031.1 | StrA streptomycin phosphotransferase | Not tested | SGI1 | Protein | 1e-53 | 48 |
| strA | AGK07089.1 | StrA streptomycin phosphotransferase | Not tested | SGI1 | Protein | 1e-53 | 48 |
| strA | AFV47972.1 | streptomycin (3') phosphotransferase StrA | Not tested | AbaR25 | Protein | 1e-53 | 48 |
| strA | YP_001800932.1 | aminoglycoside-3''-phosphotransferase | Not tested | Not named | Protein | 1e-53 | 48 |
| strA | CAJ77025.1 | Streptomycin phosphotransferase A | Not tested | AbaR1 | Protein | 7e-54 | 48 |
| BJAB0868_00286 | YP_008211612.1 | Aminoglycoside phosphotransferase | Not tested | AbaR26 | Protein | 6e-53 | 48 |
| ABK1_0266 | YP_005512838.1 | StrA | Not tested | AbaR4d | Protein | 1e-53 | 48 |
| BJAB07104_00282 | YP_008207747.1 | Aminoglycoside phosphotransferase | Not tested | AbaR25 | Protein | 1e-53 | 48 |
| ABZJ_00266 | YP_005524222.1 | hypothetical protein | Not tested | AbaR22 | Protein | 1e-53 | 48 |
| ABK1_0258 | YP_005512830.1 | StrA | Not tested | AbaR4d | Protein | 2e-53 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| MASS_2303 | YP_008022769.1 | streptomycin 3''-kinase | DQ336355.1.orf1.gene | Protein | 2e-55 | 55 |
| MASS_2303 | YP_008022769.1 | streptomycin 3''-kinase | AF024602.1.gene5.p01 | Protein | 6e-54 | 48 |
| MASS_2303 | YP_008022769.1 | streptomycin 3''-kinase | K00432.1.orf2.gene.p | Protein | 1e-31 | 43 |
