|
Name : MASS_1921 (MASS_1921) Accession : YP_008022387.1 Strain : Mycobacterium abscessus 50594 Genome accession: NC_021282 Putative virulence/resistance : Virulence Product : glutamine synthetase, type I Function : - COG functional category : - COG ID : - EC number : - Position : 1948760 - 1950196 bp Length : 1437 bp Strand : - Note : - DNA sequence : ATGGCGTTCAGTAGCCCCGACGAGGTATTCAAGTTCATTGCCGACGAGAAGGTCGAGTACGTGGACGTCAGGTTCTGTGA CCTGCCGGGCGTCGTGCAGCACTTCTCGATCCCGGCTTCGGCCTTCGATCAGAGCGTTTTCGACGACGGCCTGGCGTTCG ACGGTTCCTCGGTCCGTGGTTTCCAGTCGATCCACGAATCGGACATGCTCCTGCTCCCCGACATCTCGACCGCGCGCGTC GACCCTTTCCGCGCCGCTAAGACGCTGAACATCAACTTCTTCGTGCACGACCCGTTCACCCGCGAGGCCTACTCGCGTGA CCCTCGCAATGTCGCCCGCAAGGCCGAGCAGTACCTGGCCAGCACCGGCATCGCCGACACCTGCTACTTCGGTGCGGAGG CCGAGTTCTACATCTTCGACTCGGTGACCTTCGATTCCAAGATGAACGGCACCTTCTACGAGATCGACTCGGAGTCGGGC TGGTGGAACACCGGAGAGCCCTACGAGGAGGACGGTAGCCCGAACCGCGGCTACAAGGTCCGCCCCAAGGGCGGTTACTT CCCGGTCGCCCCCTACGACCACTACGTCGACCTGCGCGACGAGATGTCGACCAACCTGATCAACGCCGGGTTCACCCTGG AGCGCGGCCACCACGAGGTGGGCACCGCCGGCCAGGCCGAGATCAACTACAAGTTCGACACGCTGCTGGCCGCGGCCGAC GACGTGCTGCTGTTCAAATACATCATCAAGAACACCGCCTGGGCCAACGGCAAGACTGTCACCTTCATGCCCAAGCCGCT GTTCGGTGACAACGGCTCCGGCATGCACGCGCACCAGTCGCTGTGGAAGGACGGCAAGCCCCTGTTCCACGATGAGGCCG GTTACGCCGGGCTGTCGGATCTGGCCCGCCACTACATCGGCGGCATCCTGCACCACGCCCCGTCGCTGCTGGCGTTCACC AACCCGACGGTGAACTCCTACAAGCGTCTGGTGCCGGGCTACGAGGCTCCGATCAACCTGGTGTACAGCCAGCGCAACCG CTCTGCCTGCGTGCGCATCCCGATCACCGGCAACAACCCGAAGGCCAAGCGTCTCGAGTTCCGCTGCCCGGACAGCTCGG GTAACCCGTACCTGGCGTTCGCGGCCATGCTGATGGCAGGCATCGACGGCATCAAGAACAAGATCGAGCCGCTGGCCCCG GTCGACAAGGACCTGTACGAGCTGCCTCCCGAGGAGGCCGCCGGTATCCCGCAGGCCCCGACCAGCCTCGCCACGGTGAT CGACAACCTCGAGAAGGATCACGAATACCTCACCGAGGGTGGCGTTTTCACTTCCGACTTGATCGAGACCTGGATCTCGT ACAAGCGCGAGAACGAGATCGAGCCGATCAACATCCGGCCTCACCCGTATGAGTTCGCGCTCTACTACGACGTGTAA Protein sequence : MAFSSPDEVFKFIADEKVEYVDVRFCDLPGVVQHFSIPASAFDQSVFDDGLAFDGSSVRGFQSIHESDMLLLPDISTARV DPFRAAKTLNINFFVHDPFTREAYSRDPRNVARKAEQYLASTGIADTCYFGAEAEFYIFDSVTFDSKMNGTFYEIDSESG WWNTGEPYEEDGSPNRGYKVRPKGGYFPVAPYDHYVDLRDEMSTNLINAGFTLERGHHEVGTAGQAEINYKFDTLLAAAD DVLLFKYIIKNTAWANGKTVTFMPKPLFGDNGSGMHAHQSLWKDGKPLFHDEAGYAGLSDLARHYIGGILHHAPSLLAFT NPTVNSYKRLVPGYEAPINLVYSQRNRSACVRIPITGNNPKAKRLEFRCPDSSGNPYLAFAAMLMAGIDGIKNKIEPLAP VDKDLYELPPEEAAGIPQAPTSLATVIDNLEKDHEYLTEGGVFTSDLIETWISYKRENEIEPINIRPHPYEFALYYDV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | Not tested | cag PAI | Protein | 8e-89 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| MASS_1921 | YP_008022387.1 | glutamine synthetase, type I | VFG1399 | Protein | 0.0 | 85 |
