Gene Information

Name : MASS_1914 (MASS_1914)
Accession : YP_008022380.1
Strain : Mycobacterium abscessus 50594
Genome accession: NC_021282
Putative virulence/resistance : Virulence
Product : putative transcriptional regulatory protein PrrA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1943350 - 1944066 bp
Length : 717 bp
Strand : +
Note : -

DNA sequence : 
GTGGCGATGACACAGGAAACTACCGCCCGTCACAAGGTGTTGATGGTCGATGACGACCCGGACGTTCGGAACTCGGTAGC
CCGCGGGCTACGCCACTCGGGTTTCGACGTCCGGGTCGCCGTCGATGGCCGCGACGCGCTCACCCAGCTCGCGGCCGATG
AGCCCGATGCCCTGGTACTCGACGTGCAGATGCCCGAGCTGGACGGGGTTGCGGTGGTCACCGCCCTGCGGGCCCTGGGT
AACGACATTCCGATCTGCGTGCTCAGTGCACGCGACACCGTCAACGACCGAATCGCCGGCCTGGAGGCCGGTGCCGACGA
CTACTTGACCAAACCCTTTGACCTCGGCGAGCTGGTGGCTCGCCTGCGTGCGCTGCTGCGCCGTCGCGGCGCCGGTTCGG
GCGGCCTCGCCGATTCCGCCATCACCGTCGGACAGATCACGGTGGACGTGTCGCGCCGCTTGGTCTTTGTCAACGGAGAA
CGTGTCGAGCTGAGTAAGCGGGAGTTCGATCTGCTGGTGGTGCTGGCCGAGAACACCGGTGTGGTGCTGAGCCGCACCCG
GCTGCTGGAATTGGTGTGGGGGTACGACTTTGACGTCGAGACCAATGTGGCCGATGTCTTCGTCAGCTATTTGCGCCGCA
AGCTGGAAGCCGGGGGAGCCGCGCGAGTCATCCATACCGTCAGGGGAGTCGGCTACGTGATGCGGGAAGAGCCGTGA

Protein sequence : 
MAMTQETTARHKVLMVDDDPDVRNSVARGLRHSGFDVRVAVDGRDALTQLAADEPDALVLDVQMPELDGVAVVTALRALG
NDIPICVLSARDTVNDRIAGLEAGADDYLTKPFDLGELVARLRALLRRRGAGSGGLADSAITVGQITVDVSRRLVFVNGE
RVELSKREFDLLVVLAENTGVVLSRTRLLELVWGYDFDVETNVADVFVSYLRRKLEAGGAARVIHTVRGVGYVMREEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 9e-28 41
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MASS_1914 YP_008022380.1 putative transcriptional regulatory protein PrrA HE999704.1.gene1528. Protein 3e-37 42
MASS_1914 YP_008022380.1 putative transcriptional regulatory protein PrrA BAC0308 Protein 2e-31 42
MASS_1914 YP_008022380.1 putative transcriptional regulatory protein PrrA AE000516.2.gene3505. Protein 2e-27 42
MASS_1914 YP_008022380.1 putative transcriptional regulatory protein PrrA NC_002951.3238224.p0 Protein 3e-31 41
MASS_1914 YP_008022380.1 putative transcriptional regulatory protein PrrA NC_007793.3914065.p0 Protein 3e-31 41
MASS_1914 YP_008022380.1 putative transcriptional regulatory protein PrrA NC_002758.1121390.p0 Protein 3e-31 41
MASS_1914 YP_008022380.1 putative transcriptional regulatory protein PrrA NC_010079.5776364.p0 Protein 3e-31 41
MASS_1914 YP_008022380.1 putative transcriptional regulatory protein PrrA NC_002952.2859858.p0 Protein 3e-31 41
MASS_1914 YP_008022380.1 putative transcriptional regulatory protein PrrA NC_007622.3794948.p0 Protein 3e-31 41
MASS_1914 YP_008022380.1 putative transcriptional regulatory protein PrrA NC_003923.1003417.p0 Protein 3e-31 41
MASS_1914 YP_008022380.1 putative transcriptional regulatory protein PrrA NC_013450.8614146.p0 Protein 3e-31 41
MASS_1914 YP_008022380.1 putative transcriptional regulatory protein PrrA BAC0125 Protein 6e-29 41
MASS_1914 YP_008022380.1 putative transcriptional regulatory protein PrrA NC_002952.2859905.p0 Protein 4e-30 41
MASS_1914 YP_008022380.1 putative transcriptional regulatory protein PrrA NC_009782.5559369.p0 Protein 2e-30 41
MASS_1914 YP_008022380.1 putative transcriptional regulatory protein PrrA NC_002951.3237708.p0 Protein 2e-30 41
MASS_1914 YP_008022380.1 putative transcriptional regulatory protein PrrA NC_007622.3794472.p0 Protein 3e-30 41
MASS_1914 YP_008022380.1 putative transcriptional regulatory protein PrrA NC_002758.1121668.p0 Protein 2e-30 41
MASS_1914 YP_008022380.1 putative transcriptional regulatory protein PrrA NC_009641.5332272.p0 Protein 2e-30 41
MASS_1914 YP_008022380.1 putative transcriptional regulatory protein PrrA NC_013450.8614421.p0 Protein 2e-30 41
MASS_1914 YP_008022380.1 putative transcriptional regulatory protein PrrA NC_007793.3914279.p0 Protein 2e-30 41
MASS_1914 YP_008022380.1 putative transcriptional regulatory protein PrrA NC_003923.1003749.p0 Protein 3e-30 41
MASS_1914 YP_008022380.1 putative transcriptional regulatory protein PrrA NC_002745.1124361.p0 Protein 2e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MASS_1914 YP_008022380.1 putative transcriptional regulatory protein PrrA VFG1389 Protein 1e-55 60
MASS_1914 YP_008022380.1 putative transcriptional regulatory protein PrrA VFG1390 Protein 1e-44 50
MASS_1914 YP_008022380.1 putative transcriptional regulatory protein PrrA VFG1386 Protein 3e-37 46
MASS_1914 YP_008022380.1 putative transcriptional regulatory protein PrrA VFG0596 Protein 4e-28 41