Gene Information

Name : MASS_1573 (MASS_1573)
Accession : YP_008022039.1
Strain : Mycobacterium abscessus 50594
Genome accession: NC_021282
Putative virulence/resistance : Unknown
Product : IS1137, transposase orfB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1602854 - 1603807 bp
Length : 954 bp
Strand : -
Note : -

DNA sequence :
GTGGAGTTCATCAGCGCCCACCAGCACATGCGGGTGGGCGTTGATGGTCTCAAGTGGGGTGTCGAGTCGATGTGCGCTGT
GCTTTCCGAGTACGGCGTCACGATCGCCCCGTCGACGTATTACGCCCACCGCGCCCGTCAGGGCCCCTCGAAAGCCGACT
GGGCCGATGCGCAGGTGATCGATGCGATCTGGCAGCTTCGCCAATCGCAGAGTCTGTACCGAGTCCTGGGCGCTCGTAAG
ACATGGATTGTATTGCGCACCAATGGTATCGACGTATCGCGCTGTGTCGTGGAACGGGTCATGCGGGAGATGGGTTGGCG
GGGTGCGTGCAAGCGCCGGCGGGTGCGCACCACCGTCGCCGATCCGGCAGCGACGCGAGCCCCGGATCGGGTCCGGCGTA
ATTTCGTCGCCGGTGCGCCTGACCGATTGTGGGTGGCCGATTTCACCTACTGCCGGACTCGTGCCGGCTGGGCCTACACG
GCGTTCGTCACCGATGTCTATGCCCGCAAGATCGTGGGTTGGAAGGTGGCTACCGAGATGACCCAGAAGCTGGTGACCGA
TGCGATCGACCACGCTATCGACACCAGAAAGCGTTCGGGTGCAGCATCTTTGGATTCACTTATCCACCACAGCGACGCGG
GCTCGCAATACACCGCGGTCGCGTTCACCGAACGTCTGGCCGCTGAGGGGATCCTGCCTTCAGTCGGATCCGTCGGGGAT
AGTTTCGATAATGCTCTGGCCGAATCGGTGAACAGCAGCTACAAGACCGAACTCATCGACCGCCAGCCGCTCTATCCCGG
TGCCACCGAACTGGCGCTGGGGACCGCCGAATGGGTGGCCTTCTACAACCGTCAGCGACCCAACGGCTACTGCCAGGACC
TGACCCCCGATCGGGCCGAAGCGCTCTACTACCATCGCCAACGGCACCCTCATGCCGAGGAGGCACTCAGATAA

Protein sequence :
MEFISAHQHMRVGVDGLKWGVESMCAVLSEYGVTIAPSTYYAHRARQGPSKADWADAQVIDAIWQLRQSQSLYRVLGARK
TWIVLRTNGIDVSRCVVERVMREMGWRGACKRRRVRTTVADPAATRAPDRVRRNFVAGAPDRLWVADFTYCRTRAGWAYT
AFVTDVYARKIVGWKVATEMTQKLVTDAIDHAIDTRKRSGAASLDSLIHHSDAGSQYTAVAFTERLAAEGILPSVGSVGD
SFDNALAESVNSSYKTELIDRQPLYPGATELALGTAEWVAFYNRQRPNGYCQDLTPDRAEALYYHRQRHPHAEEALR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 1e-40 46
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 7e-45 45
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 7e-45 45
Z1221 NP_286756.1 transposase Not tested TAI Protein 3e-44 44
Z1198 NP_286733.1 transposase Not tested TAI Protein 8e-44 44
Z1638 NP_287141.1 transposase Not tested TAI Protein 8e-44 44
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 3e-44 44
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 3e-33 44
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 3e-42 44
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 2e-43 44
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 3e-43 44
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 1e-43 44
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 6e-42 44
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 6e-42 44
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 6e-42 44
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 3e-42 43
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 2e-42 43
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 2e-44 43
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 5e-44 43
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 9e-38 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MASS_1573 YP_008022039.1 IS1137, transposase orfB VFG1602 Protein 1e-42 43