Gene Information

Name : MASS_1085 (MASS_1085)
Accession : YP_008021551.1
Strain : Mycobacterium abscessus 50594
Genome accession: NC_021282
Putative virulence/resistance : Virulence
Product : putative resolvase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1128657 - 1129211 bp
Length : 555 bp
Strand : +
Note : -

DNA sequence :
ATGCTGATTGGCTATGCACGAGTGAGTACCGCCGAGCAGTCCACAGACCTCCAGCTCGACGCACTACATGGGGCTCACGT
TGAGCAGGTGTTCACCGACGAGGGGATCAGCGGCTCGGTGTCCAGCCGCCCTGAACTCGACCGCTGCCTGGCACACCTGC
GGGAGGGTGACACTCTTGTCGTGTGGCGACTCGACCGCCTGGCCCGCTCACTCAAGAACTTGCTCGAACTGGTGGAGAGC
GTGTCCCAGAGAGGGATTCATCTACGCTCGTTGACCGAGGCTATCGACACGTCCTCGGCCAGTGGACGGCTCGTGCTGAG
CGTTTTCGGGGCTCTCGCTGAGTTCGAGCGCTCCTTGATTATCGAGAGGACTCAAGCTGGCTTGGCGGCTGCTCGGTTGC
GGGGTGCCCGCATCGGTCGCCCCACTGCGATGAACGTGGGTCAAATTGAGCAGGCTCGGACCTTGGTCTCGGCTGGGCAT
CGAGTGCCCGATGTGGCCAGGACGCTGGGAGTCGGGCGCTCCACGCTGTATCGCGCACTGGGAGAATCGGATTGA

Protein sequence :
MLIGYARVSTAEQSTDLQLDALHGAHVEQVFTDEGISGSVSSRPELDRCLAHLREGDTLVVWRLDRLARSLKNLLELVES
VSQRGIHLRSLTEAIDTSSASGRLVLSVFGALAEFERSLIIERTQAGLAAARLRGARIGRPTAMNVGQIEQARTLVSAGH
RVPDVARTLGVGRSTLYRALGESD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
res AGF35059.1 resolvase Not tested SGI1 Protein 6e-32 55
res AGK06929.1 resolvase Not tested SGI1 Protein 6e-32 55
res AGK06966.1 resolvase Not tested SGI1 Protein 6e-32 55
res AGK07012.1 resolvase Not tested SGI1 Protein 6e-32 55
res AGK07070.1 resolvase Not tested SGI1 Protein 6e-32 55
res AAK02044.1 resolvase Not tested SGI1 Protein 6e-32 55
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 6e-32 55
res AGF34985.1 resolvase Not tested SGI1 Protein 6e-32 55
res AGF35025.1 resolvase Not tested SGI1 Protein 6e-32 55
1_318 CAJ77076.1 Resolvase Not tested AbaR1 Protein 5e-29 51
ABTW07_3871 YP_005797119.1 resolvase IS26 Not tested AbaR4e Protein 7e-29 51
tnpR ACN81015.1 TnpR resolvase Not tested AbaR5 Protein 7e-29 51
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 8e-33 50
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 1e-27 46
SH1761 YP_253676.1 DNA-invertase Not tested ¥ÕSh1 Protein 4e-28 46
binL YP_254524.1 DNA-invertase Not tested ¥ðSh2 Protein 4e-28 46
tnpR ACF06154.1 resolvase Not tested Tn5036-like Protein 2e-24 45
tnpR ACY75537.1 TnpR Not tested Tn6060 Protein 1e-21 43
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 2e-21 42
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 3e-21 42
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 2e-21 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MASS_1085 YP_008021551.1 putative resolvase VFG1030 Protein 8e-22 42