Gene Information

Name : HMPREF0409_01919 (HMPREF0409_01919)
Accession : YP_008018390.1
Strain : Fusobacterium sp. 4_8
Genome accession: NC_021281
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 32839 - 34083 bp
Length : 1245 bp
Strand : +
Note : -

DNA sequence : 
ATGGAAAATAGTTCTGAAAAAATAGAAAAATATTTTAAAAAAGCTATCAATAGTACTATGAACAATAATAAAAATTCATA
TATTGAAGATATAGAGGAACTATTTATTCGTGAAAATGTCAATTCTAACAAAGGAATTTTTTCAATATTATTAGAAGCTA
TAAAATTTTCAGCAAGTGATATTCATATTGAAGCATTAACAGATAAAATAAGAATAAGATATAGAATTAATGGCATTTTA
AAAGAAGTTGCAGAAATTGATAAAACTTTTTTATCTTCAATAGTTTCTAAATTAAAAATTTTATCTTCTCTTGATATAGT
TGAAAAAAGAAAGCCCCAAGATGGTAGATTTTCTTTAAGATATAAAGGAAGAGAAATTGATTTTAGAACTTCTATTATTC
CAACTATGAACGGAGAGAAAATAGTAATTAGAATTTTAGATAAATTCAATTATAATTTTACTTTGGAAGATTTGTATTTA
TCAGAGGAAAATAAAAAAATTTTCTATAAGGCAATAAATCAAAATACTGGAATTATCTTAGTTAATGGACCAACAGGTTC
AGGAAAATCAAGTACACTATACAGTATTTTAAAATATAAAAATAGGGAAGAAGTTAATATTTCAACTGTTGAGGACCCTA
TTGAATATCAAATTGAAGGAATAAATCAAGTACAATGTAGAAATGAAATAGGTTTAGGTTTTTCAACAATTTTAAGAGCA
TTATTAAGGCAGGATCCAGATATTTTAATGGTGGGAGAAATAAGAGATAGAGAAACAGCAGAGATTGCAGTTAAAGCTTC
ACTCACAGGACATTTAGTTTTTTCAACTCTACACTCAAATGATAGCTTAGGTTGTATAAATAGGCTAGTAAATTTAGGAA
TTGATGGTTATTTATTGAGTTTAGTTTTGCAGATGGTAGTATCCCAAAGATTAGTTAGGAAGTTGTGTCCTCATTGTAAA
AAAGAAGATGAAAATTATAAAGAAAAGTTAAAAAGTTTAAATCTTTCAGAAGAAAAATATAAGGATATAAAATTCTATAC
TTCTGGGGGTTGTGAGAAATGTATGGGAACTGGCTATATAGGAAGAATACCTGTTTTTGAAATAATATATTTTGATGATA
TCTTAAAAGATATGTTAGCACAGAAAAAGGAGTTAAAACAAAATTTTAAAACTTTACTTGATGATGCAATGGATAAGGCA
AAAGAAGGCTTGACTTCCTTAGATGAGATAATGAGGCAACTATGA

Protein sequence : 
MENSSEKIEKYFKKAINSTMNNNKNSYIEDIEELFIRENVNSNKGIFSILLEAIKFSASDIHIEALTDKIRIRYRINGIL
KEVAEIDKTFLSSIVSKLKILSSLDIVEKRKPQDGRFSLRYKGREIDFRTSIIPTMNGEKIVIRILDKFNYNFTLEDLYL
SEENKKIFYKAINQNTGIILVNGPTGSGKSSTLYSILKYKNREEVNISTVEDPIEYQIEGINQVQCRNEIGLGFSTILRA
LLRQDPDILMVGEIRDRETAEIAVKASLTGHLVFSTLHSNDSLGCINRLVNLGIDGYLLSLVLQMVVSQRLVRKLCPHCK
KEDENYKEKLKSLNLSEEKYKDIKFYTSGGCEKCMGTGYIGRIPVFEIIYFDDILKDMLAQKKELKQNFKTLLDDAMDKA
KEGLTSLDEIMRQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 7e-64 44
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 5e-64 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0409_01919 YP_008018390.1 hypothetical protein VFG1876 Protein 2e-64 45
HMPREF0409_01919 YP_008018390.1 hypothetical protein VFG2048 Protein 1e-65 44
HMPREF0409_01919 YP_008018390.1 hypothetical protein VFG0182 Protein 6e-69 44