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Name : HMPREF0409_01486 (HMPREF0409_01486) Accession : YP_008018603.1 Strain : Fusobacterium sp. 4_8 Genome accession: NC_021281 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : - COG ID : - EC number : - Position : 263266 - 264564 bp Length : 1299 bp Strand : + Note : - DNA sequence : ATGATTAAAAATGTTAAAATTTGTGTAGTTGGAATGGGTTATGTAGGATTGCCTTTGGCAATTGCTTTTGCTGAAAAAGA CTTTGATGTTATTGGTTTTGATTTAAATCAAAAAAAAATAGATAAATACTTACAAGGTATTGATCCAACAAATGAAGTAG GAAATGAAAAAATAAGAAATATAAAAAATTTGGAATTTACTTCTGATGAAAAGAAAATATCAGAAGCAAGTTTTATTATA GTAGCAGTACCAACTCCAGTATTAGAAAATAAATCACCTGATTTTAGACCGTTGATAGGAGCTTCAACTATTATTGGAAG AAATATGAAAAAAAGTTCAATAGTTGTTTATGAGTCTACTGTTTATCCAGGAGCAACTGAAGAAGTATGTTTACCTATTT TAGAAAAAGAATCTGGTATGAGGTGTGGAATAGATTTTAAAATAGGTTATTCACCTGAAAGGGTTAATCCAGCTGATAAA GAGAATACATTAACAAAAATTAAAAAAATCACATCAGGAATAGATAAAGAAAGTTCAAATATAATAGCAGAAGTTTATGG TTCTATAATAGAAGCTGGAATACATAGAGCAAGTTCAATTAAAGTTGCAGAAGCAGCAAAAGTTATAGAAAATTCTCAAA GAGATATAAATATTGCCTTTATAAATGAATTAGCATTGATTTTTGATAGAATAGGAATTGATACTTTGGAAGTTTTAGAA GCAGCAGGAACAAAATGGAATTTTTTACCATATAGACCAGGATTAGTTGGAGGGCATTGCATAGGTGTGGATCCATATTA TCTTGCAGATAAAGCAAATAAATTAGGTTATCATGCACAAGTAATATTAGCTGGAAGAAGAATAAATGATAGCATGGCTA AATTTGTAGCAGAAAAAACAATAAAAAAGTTGATAAATGCAAATATAAGAGTAAAAGGAGCAGATATTTTAGTAATGGGA TTAACTTTTAAAGAAAATTGTCCTGATTTGAGAAACTCTAAAGTAAATGATATAATTTTGGAATTAAGAGAATATGGAGT GAATGTTCATGTAGTAGATCCTATGGCAGATAAAATAGAAGCTAAAAAAGAGTATAATATTGATTTAGAAGATCCAAAAG ATATAAAAAATATGGATGCTATTATAGTAGCTGTTGGACATAAAGAATATAGAGATATGGATATAAAAGATTTACACAAA TATTATAATGAAGTTTATAGTAAACCATTATTAATAGATGTAAAATCTATCTTTAATAAAGAAGAAGCTGAAAAAGAATA TGATTATTGGAGGCTATAA Protein sequence : MIKNVKICVVGMGYVGLPLAIAFAEKDFDVIGFDLNQKKIDKYLQGIDPTNEVGNEKIRNIKNLEFTSDEKKISEASFII VAVPTPVLENKSPDFRPLIGASTIIGRNMKKSSIVVYESTVYPGATEEVCLPILEKESGMRCGIDFKIGYSPERVNPADK ENTLTKIKKITSGIDKESSNIIAEVYGSIIEAGIHRASSIKVAEAAKVIENSQRDINIAFINELALIFDRIGIDTLEVLE AAGTKWNFLPYRPGLVGGHCIGVDPYYLADKANKLGYHAQVILAGRRINDSMAKFVAEKTIKKLINANIRVKGADILVMG LTFKENCPDLRNSKVNDIILELREYGVNVHVVDPMADKIEAKKEYNIDLEDPKDIKNMDAIIVAVGHKEYRDMDIKDLHK YYNEVYSKPLLIDVKSIFNKEEAEKEYDYWRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 7e-109 | 56 |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 1e-101 | 52 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 1e-101 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HMPREF0409_01486 | YP_008018603.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 5e-102 | 52 |
