Gene Information

Name : HMPREF0409_01488 (HMPREF0409_01488)
Accession : YP_008018601.1
Strain : Fusobacterium sp. 4_8
Genome accession: NC_021281
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 261931 - 262554 bp
Length : 624 bp
Strand : +
Note : -

DNA sequence : 
ATGTATAAATTATTTTTTAAAAGAATAATTGATATTTTTTTAAGTGTTATTTTTATACTTTTGTTTTGGTGGTTATACAT
TATCATAGTAATTTTAGTTAGAAGGAAATTAGGAAGCCCAGTTATATTTAGACAAAAAAGACCTGGATTAAATGAGAAGA
TTTTTACTATGTATAAATTTAGAACTATGACAGATGAAAAAGATAAAGAGGGTAATTTGTTATCAGATAAAGATAGACTG
ACTAAATTTGGAAAATTTTTACGTTCAACTAGCTTAGACGAAATACCTGAACTATGGAATGTAATAAAAGGTGAGATGTC
TTTAGTTGGTCCAAGACCTTTAATGCCAAAATATTTAGCATATTATACTAAATCAGAAAAGAGAAGGCATGAGGTTAAAC
CTGGAATAACTGGTTGGGCTCAAGTTAATGGTAGAAATTCTTTAACATGGGAAGATAAATTTAGATATGATATAGAATAT
GTCAATAGTATTAGTTTCTGGCTTGATTTAAAGATAATCTTCATAACAATAAAAAAAGTATTTAATAGACAAGATATCTC
AGATTTTTCTGATGAAAATAAAGAAGTAGATTTTGATGAATATAGAAGAATGGAGAAAAAATGA

Protein sequence : 
MYKLFFKRIIDIFLSVIFILLFWWLYIIIVILVRRKLGSPVIFRQKRPGLNEKIFTMYKFRTMTDEKDKEGNLLSDKDRL
TKFGKFLRSTSLDEIPELWNVIKGEMSLVGPRPLMPKYLAYYTKSEKRRHEVKPGITGWAQVNGRNSLTWEDKFRYDIEY
VNSISFWLDLKIIFITIKKVFNRQDISDFSDENKEVDFDEYRRMEKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 2e-26 44
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 2e-27 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0409_01488 YP_008018601.1 hypothetical protein VFG1309 Protein 3e-25 42
HMPREF0409_01488 YP_008018601.1 hypothetical protein VFG1369 Protein 7e-20 42