Gene Information

Name : HMPREF0409_01982 (HMPREF0409_01982)
Accession : YP_008020435.1
Strain : Fusobacterium sp. 4_8
Genome accession: NC_021281
Putative virulence/resistance : Unknown
Product : IS605 OrfB family transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2230877 - 2231980 bp
Length : 1104 bp
Strand : -
Note : -

DNA sequence :
ATGGAAAAAGCATATAAGTTTAGATTTTATCCAACTAAAACTCAAATAAAAAAATTAAATAGTACTTTTGGTTGTGTAAG
ATATGTCTATAATCATTTTTTAGATTTAAAACAAAAGCTATATAGTACAGAGAAAAAGTCTATATCATATAGTGAGTGTA
GTAAAGAATTAACAGTTTTAAAGAAAGATAAAGGATGGTTAAAAGATGTAGATAAATTTTCTTTACAAAATTCTTTAAAA
GATTTAGATGTAGCCTATAAGAACTTTTTTAGTGGAAAGGGTTATCCAAAGTTTAAATCTAAGAAAGATAATAGAAAATC
ATACAGAACTAATTATACTAATAATAATATAGAGTTTTTAGATAAATGGATAAAAGTACCTAAGTTAGGAAAACTAAAAA
TAAGAGATAAGATGAAACTGCAAGGAAGAATAATAAGTGCAACAATAACACAAGTACCTAGTGGAAAATATTATATATCT
TTATGTTGTACAGATGTAGAAGTAGAAAAATTAGAAGGTACAAATAAGAATGTTGGAATAGATTTAGGTATAAAGGACTT
TGCGATTACAAGTGATGAAGCCATAATAGAAAATCCAAAATATTTACAAAAATCTTTGAATAAACTAGCGATATTACAAA
GAAAACTATCACGAAAACCAAAGGGGAGTTCAAATAGAAATAAAGCTAGGATAAAAGTAGCAAGATTATTTGAAAAGATA
ACAAATCAAAGAGAAGATTTTATGCAAAAGTTATCAACAATGCTAATAAAAGAATATGATATTATCTGTATGGAAGATTT
ACAAGTAAAAAATATGGTAAAAAATCATAAATTAGCAAGAAATATTGTAGATGTATCATGGAGTGAATTTAATAGAATAC
TAAGTTATAAAGCAAAATGGTATGGAAGAATAATAGTAAGAGTAGATAAATTTTTTGCAAGTAGTCAAATATGTAACTGT
TGTGGATATAAGAATGAAGAAGTAAAAGATTTAAGTATAAGAGAATGGACTTGTCCAGTATGTAGAGCTGTACATAATAG
AGATATAAATGCAGCAAAAAACATATTAAAAGAAGGACTAAGAATATTAGGTATAAGTGCTTAA

Protein sequence :
MEKAYKFRFYPTKTQIKKLNSTFGCVRYVYNHFLDLKQKLYSTEKKSISYSECSKELTVLKKDKGWLKDVDKFSLQNSLK
DLDVAYKNFFSGKGYPKFKSKKDNRKSYRTNYTNNNIEFLDKWIKVPKLGKLKIRDKMKLQGRIISATITQVPSGKYYIS
LCCTDVEVEKLEGTNKNVGIDLGIKDFAITSDEAIIENPKYLQKSLNKLAILQRKLSRKPKGSSNRNKARIKVARLFEKI
TNQREDFMQKLSTMLIKEYDIICMEDLQVKNMVKNHKLARNIVDVSWSEFNRILSYKAKWYGRIIVRVDKFFASSQICNC
CGYKNEEVKDLSIREWTCPVCRAVHNRDINAAKNILKEGLRILGISA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CPR_0626 YP_697953.1 ISCpe2, transposase orfB Not tested Not named Protein 2e-68 45