Gene Information

Name : HMPREF0409_01671 (HMPREF0409_01671)
Accession : YP_008020184.1
Strain : Fusobacterium sp. 4_8
Genome accession: NC_021281
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1936390 - 1937499 bp
Length : 1110 bp
Strand : +
Note : -

DNA sequence :
ATGGATAAAAATTCAGATGAAAAATATATGGCAAGAGCTATTGAACTTGCTAAAAGAGGGACAGGAAGTGTAAACCCTAA
TCCCCTTGTTGGTGCAGTTGTAGTTAAAGATGGCAAAATTATCGGTGAAGGTTGGCATAAAAAATATGGTGGTCCTCATG
CAGAAGTTTGGGCTTTAAATGAAGCAGGAGAAAATGCAAAAGGAGCTACTATCTATGTAACCTTAGAGCCTTGTTCTCAT
CAGGGAAAAACTCCTCCCTGTGCTAAAAGAATTGTTGAAGCAGGTATAAAAAGATGTGTCGTTGCTTGTATTGACCCTAA
TCCTTTGGTTGCAAGTAAAGGTATAAAAATAATAGAAGATGCAGGAATTGAAGTTAAACTTGGAATTTTAGAAAAAGAAG
CCAAAGATGTGAATAAAATATTTTTAAAATATATAGAAAATAAAATTCCTTATCTATTTTTAAAATGTGGAATTACTCTT
GATGGAAAAATAGCAACAAGAAGTGGAAAATCTAAATGGATAACCAATGAAATAGCCAGAGAAAAAGTACAATTTTTAAG
GACTAAATTTATGGCTATTATGGTGGGAATAAATACTGTTTTAAAAGATAATCCTAGTTTAGATTCAAGACTTGATGAAA
AAAAGTTTGGAATAGAAAAAAGAAATCCTTTTAGAGTTGTTATAGACCCAAATTTAGAAAGTCCAATAGAAGCTAAATTT
TTAAATTTTAATGATGGAAAGGCAATAATAATTACATCTAATGATAATAGAGAGCTTGAAAAGATTAAAGAATATAAAAA
TCTAGGAACAAGATTTATTTTTCTTGAAGGAAAAATATTTAAGATGAAAGATATATTAAAAGAGTTAGGAAAATTAGAAA
TTGATTCTGTTCTTTTAGAAGGAGGAAGTGGACTTATTTCAACTGCTTTTAAAGAAAATATAATAGATGCAGCAGAAATA
TTCATTGCTCCAAAAATTATTGGAGATAATTCTGCTATTCCTTTTATAAATGGATTTAACTTTGATAATATGGAAGATGT
TTTTAAACTTCCTAATCCTAAATTCAATATCTATGGAGATAACATTTCTATTGAGTTTGAAAATTTATAG

Protein sequence :
MDKNSDEKYMARAIELAKRGTGSVNPNPLVGAVVVKDGKIIGEGWHKKYGGPHAEVWALNEAGENAKGATIYVTLEPCSH
QGKTPPCAKRIVEAGIKRCVVACIDPNPLVASKGIKIIEDAGIEVKLGILEKEAKDVNKIFLKYIENKIPYLFLKCGITL
DGKIATRSGKSKWITNEIAREKVQFLRTKFMAIMVGINTVLKDNPSLDSRLDEKKFGIEKRNPFRVVIDPNLESPIEAKF
LNFNDGKAIIITSNDNRELEKIKEYKNLGTRFIFLEGKIFKMKDILKELGKLEIDSVLLEGGSGLISTAFKENIIDAAEI
FIAPKIIGDNSAIPFINGFNFDNMEDVFKLPNPKFNIYGDNISIEFENL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 4e-50 43
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 4e-50 43