Gene Information

Name : HMPREF0409_00089 (HMPREF0409_00089)
Accession : YP_008019982.1
Strain : Fusobacterium sp. 4_8
Genome accession: NC_021281
Putative virulence/resistance : Resistance
Product : methionine gamma-lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1718717 - 1719904 bp
Length : 1188 bp
Strand : +
Note : -

DNA sequence :
ATGGAAATGAAAAAACTTGGTTTAGGAACAACAGCGATACATGCAGGAACTTTAAAAAATTTATATGGAACTCTTGCAAT
GCCAATATATCAAACTTCTACTTTTATATTTGATTCAGCAGAACAAGGAGGAAGAAGATTTGCTCTTGAAGAAGCTGGAT
ATATTTACACAAGACTTGGAAATCCTACAACAACAGTATTAGAAAACAAAATTGCTGCTCTTGAAGAAGGAGAAGCTGGA
ATAGCTATGTCATCTGGTATGGGGGCTATCTCTTCAACATTATGGACTGTTTTGAAGGCTGGAGACCATGTTGTTACAGA
TAAAACTTTATATGGTTGTACTTTTGCTTTGATGAATCATGGACTTACAAAATTTGGAGTTGAAGTTACTTTTGTTGACA
CTTCTAACTTAGATGAAGTTAAAAAAGCTATGAAAGAAAATACAAGAGTTGTTTATCTTGAAACACCTGCTAATCCAAAT
TTAAAAATAGTTGACTTAGAAGGTGTATGTAAAGTTGCTCATACAAATCCAAATACTTTGGTTATAGTAGACAATACTTT
TGCAACTCCATATATGCAAAAACCTTTAAAATTAGGTGTAGATGTTGTTGTACACTCTGCAACTAAATATTTGAATGGAC
ATGGTGATGTTATAGCAGGGCTTGTTGTAACAAATAAAGAACTTGCTGATCAAATTCGTTTTGTTGGTTTAAAAGATATG
ACAGGAGCTGTTTTAGGACCTCAAGAAGCATATTATATTATAAGAGGATTAAAAACATTTGAAATTCGTATGGAAAGACA
TTGTAAAAATGCAAGAACTATTGCAGATTTCTTAAATAAACATCCAAAAGTTGAAAAAGTTTATTATCCTGGACTTGAAA
GTCATCCTGGTTATGAAATAGCAAAAAAACAAATGAAAGATTTTGGAGCTATGATTTCATTTGAACTAAAAGGTGGTTTT
GAAGCAGGTAAAACTTTATTAAATAATTTAAAATTATGTTCATTAGCAGTTTCATTAGGGGATACTGAAACTCTTATTCA
ACACCCAGCTTCTATGACACATTCTCCTTATACAAAAGAAGAAAGAGAAGCAGCAGGAATAACTGATGGATTAGTAAGAT
TATCAGTCGGACTTGAAAATGTTGAAGATATTATAGCTGATTTGGAACAAGGATTAGAAAAAATCTAA

Protein sequence :
MEMKKLGLGTTAIHAGTLKNLYGTLAMPIYQTSTFIFDSAEQGGRRFALEEAGYIYTRLGNPTTTVLENKIAALEEGEAG
IAMSSGMGAISSTLWTVLKAGDHVVTDKTLYGCTFALMNHGLTKFGVEVTFVDTSNLDEVKKAMKENTRVVYLETPANPN
LKIVDLEGVCKVAHTNPNTLVIVDNTFATPYMQKPLKLGVDVVVHSATKYLNGHGDVIAGLVVTNKELADQIRFVGLKDM
TGAVLGPQEAYYIIRGLKTFEIRMERHCKNARTIADFLNKHPKVEKVYYPGLESHPGYEIAKKQMKDFGAMISFELKGGF
EAGKTLLNNLKLCSLAVSLGDTETLIQHPASMTHSPYTKEEREAAGITDGLVRLSVGLENVEDIIADLEQGLEKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 8e-61 45
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-66 42
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-67 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0409_00089 YP_008019982.1 methionine gamma-lyase BAC0207 Protein 8e-103 56