Gene Information

Name : HMPREF0409_00162 (HMPREF0409_00162)
Accession : YP_008019913.1
Strain : Fusobacterium sp. 4_8
Genome accession: NC_021281
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1637710 - 1639185 bp
Length : 1476 bp
Strand : -
Note : -

DNA sequence :
ATGGAAAATATATTAAAAAAATCATATAAGATGTTTATAAATGGAAAATGGGTAAATTCAAGCAATGGAATTATGGTAAA
AACTTATGCTCCTTATAATAATGAATTGTTATCAGAATTTCCTGATGCAAGTGAAAATGATGTTGATTTAGCAGTTAAAA
GTGCAAAAGAAGCATTTAAAATTTGGAGAAAAACAACAGTAAAAGAAAGAGCAAAAATTTTAAATGAAATTGCTGATATT
ATAGATGAAAATAAGGATTTACTAGCAACAGTTGAAACTATGGATAATGGTAAACCAATAAGAGAAACAAAATTGGTAGA
TATTCCATTGGCAGCAACTCATTTTAGATATTTTGCAGCTTGTATTTTAGCAGATGAAGGAAAAGCAACTATTTTAGATG
AAAAATTTTTGAGTATAATTTTAAAAGAACCTATTGGAGTTGTAGGACAAATTATTCCTTGGAACTTCCCATTTTTAATG
GCAGCTTGGAAGTTGGCTCCAGCTCTTGCAGCAGGAGATACAGTCGTTTTAAAACCTTCTAGCTCAACAACATTAAGTCT
ATTAGTTTTAATGGAACTTATACAAAATGTAATTCCAAAGGGAGTTGTAAATCTAATTACAGGTAAAGGAAGTACAGCAG
GAGAATTTTTAAAGAATCATCCTGATTTAGATAAATTAGCTTTCACAGGTTCAACAGCAGTTGGTAGAGATATTGCACTT
GCAGCAGCAGAAAAATTAATTCCTGCTACTCTTGAATTAGGTGGAAAATCAGCAAATATTATTTTAGATGATGCTGATAT
GGAAAAAGCTCTTGAAGGAGCACAACTTGGAATATTATTTAATCAAGGGCAAGTTTGTTGTGCAGGTTCAAGAATATTTG
TACAAGAAGGAATATATGATGAGTTTATAGAAAAACTTGTAAAGAAATTTGAAAATATTAAAATTGGAAATCCATTAGAT
CCTACAACTGTAATGGGTAGTCAAATAGATGCAAGACAAGTAAAAACTATTTTAGATTATGTTGAAATAGCTAAACAAGA
GGGAGGAACTATTTTAACAGGAGGAGTAAAATATACTGAAAATGGTTGTGATAAAGGAAACTTTGTAAGACCTACTTTGA
TAACTAATGTTAAAAATACTTGTCGTGTTTCACAAGAAGAAATTTTTGGACCAGTGGCAGTTGTAATTAAATTTAAAACA
GATGATGAAGTTATAGCACAAGCAAATGAGAATGAATATGGACTTGGAGGAGCAGTATTTACAAAAAATATCAATAGAGC
TTTCAGAATTGCAAGAGAAATTCAAACTGGTAGAGTATGGATAAATACTTATAATCAAATCCCTGAACATGCTCCATTTG
GTGGATATAAAAAATCTGGTATAGGTAGAGAAACTCATAAAGTTATATTAGAACATTATACACAAATGAAAAATATTTTA
ATTGATTTAGAAGAAGGAACTTCTGGATTATATTAA

Protein sequence :
MENILKKSYKMFINGKWVNSSNGIMVKTYAPYNNELLSEFPDASENDVDLAVKSAKEAFKIWRKTTVKERAKILNEIADI
IDENKDLLATVETMDNGKPIRETKLVDIPLAATHFRYFAACILADEGKATILDEKFLSIILKEPIGVVGQIIPWNFPFLM
AAWKLAPALAAGDTVVLKPSSSTTLSLLVLMELIQNVIPKGVVNLITGKGSTAGEFLKNHPDLDKLAFTGSTAVGRDIAL
AAAEKLIPATLELGGKSANIILDDADMEKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFIEKLVKKFENIKIGNPLD
PTTVMGSQIDARQVKTILDYVEIAKQEGGTILTGGVKYTENGCDKGNFVRPTLITNVKNTCRVSQEEIFGPVAVVIKFKT
DDEVIAQANENEYGLGGAVFTKNINRAFRIAREIQTGRVWINTYNQIPEHAPFGGYKKSGIGRETHKVILEHYTQMKNIL
IDLEEGTSGLY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 7e-91 52
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 8e-95 49
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 8e-95 49
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 8e-95 49
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-94 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0409_00162 YP_008019913.1 hypothetical protein VFG0082 Protein 3e-91 52