Gene Information

Name : HMPREF0409_02293 (HMPREF0409_02293)
Accession : YP_008019777.1
Strain : Fusobacterium sp. 4_8
Genome accession: NC_021281
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1495033 - 1495707 bp
Length : 675 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAATTTTAGTGGTTGAAGATGAAAAAGACTTAAATAATATTATTACCAAGCACTTAAAGAAAAATAATTTCAGTGT
TGATAGTGTGTATGATGGAGAAGAGGCACTTGAATATTTAGATTATGGAAATTATGATTTAATAATATTGGATATAATGT
TGCCAAAAATGAATGGATATGAAGTTGTTAAGAATCTTAGAACAAATAAAAATGAAACACCAGTTTTAATGTTGACAGCA
AGAGATGCCATAGAGGATAAAATAAAAGGTTTAGACTTGGGGGCAGATGATTATTTAATTAAACCTTTTGATTTTGGAGA
ACTTTTAGCAAGAATCAGAGCTATTGTTAGAAGAAAATATGGGAATGTTTCTAATGAATTACAAATAGATGATTTGGTTG
TAGATACTTCAAAAAAATCAGTTACAAGAGCTGGAAAAAATATAGAATTAACAGGAAAAGAATATGAAGTATTAGAATAT
TTAATTCAAAATAAAGGTCGTGTATTGAGTAGAGATAAAATTAGAGATGGTGTGTGGGATTATGCTTATGAAGGAGAATC
AAATATTATAGATGTTTTGATTAAAAATATTCGTAAGAAAATTGATTTAGGAAATTCAAAACCCCTTATACATACAAAAA
GAGGTCTAGGCTATGTTCTCAAAGAAGATGAGTAA

Protein sequence : 
MKILVVEDEKDLNNIITKHLKKNNFSVDSVYDGEEALEYLDYGNYDLIILDIMLPKMNGYEVVKNLRTNKNETPVLMLTA
RDAIEDKIKGLDLGADDYLIKPFDFGELLARIRAIVRRKYGNVSNELQIDDLVVDTSKKSVTRAGKNIELTGKEYEVLEY
LIQNKGRVLSRDKIRDGVWDYAYEGESNIIDVLIKNIRKKIDLGNSKPLIHTKRGLGYVLKEDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-42 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-42 43
vanRB YP_001698483.1 regulatory protein Not tested Not named Protein 3e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0409_02293 YP_008019777.1 hypothetical protein BAC0083 Protein 2e-49 47
HMPREF0409_02293 YP_008019777.1 hypothetical protein BAC0111 Protein 1e-48 47
HMPREF0409_02293 YP_008019777.1 hypothetical protein BAC0308 Protein 5e-47 47
HMPREF0409_02293 YP_008019777.1 hypothetical protein BAC0197 Protein 6e-45 46
HMPREF0409_02293 YP_008019777.1 hypothetical protein BAC0125 Protein 4e-47 45
HMPREF0409_02293 YP_008019777.1 hypothetical protein BAC0347 Protein 7e-43 44
HMPREF0409_02293 YP_008019777.1 hypothetical protein BAC0638 Protein 7e-43 44
HMPREF0409_02293 YP_008019777.1 hypothetical protein NC_003923.1003417.p0 Protein 1e-38 43
HMPREF0409_02293 YP_008019777.1 hypothetical protein NC_013450.8614146.p0 Protein 1e-38 43
HMPREF0409_02293 YP_008019777.1 hypothetical protein NC_002951.3238224.p0 Protein 1e-38 43
HMPREF0409_02293 YP_008019777.1 hypothetical protein NC_007793.3914065.p0 Protein 1e-38 43
HMPREF0409_02293 YP_008019777.1 hypothetical protein NC_002758.1121390.p0 Protein 1e-38 43
HMPREF0409_02293 YP_008019777.1 hypothetical protein NC_010079.5776364.p0 Protein 1e-38 43
HMPREF0409_02293 YP_008019777.1 hypothetical protein AE015929.1.gene1106. Protein 8e-33 43
HMPREF0409_02293 YP_008019777.1 hypothetical protein NC_002952.2859858.p0 Protein 1e-38 43
HMPREF0409_02293 YP_008019777.1 hypothetical protein NC_007622.3794948.p0 Protein 1e-38 43
HMPREF0409_02293 YP_008019777.1 hypothetical protein NC_002952.2859905.p0 Protein 2e-40 43
HMPREF0409_02293 YP_008019777.1 hypothetical protein NC_002758.1121668.p0 Protein 2e-40 43
HMPREF0409_02293 YP_008019777.1 hypothetical protein NC_009641.5332272.p0 Protein 2e-40 43
HMPREF0409_02293 YP_008019777.1 hypothetical protein NC_013450.8614421.p0 Protein 2e-40 43
HMPREF0409_02293 YP_008019777.1 hypothetical protein NC_002951.3237708.p0 Protein 2e-40 43
HMPREF0409_02293 YP_008019777.1 hypothetical protein NC_002745.1124361.p0 Protein 2e-40 43
HMPREF0409_02293 YP_008019777.1 hypothetical protein NC_009782.5559369.p0 Protein 2e-40 43
HMPREF0409_02293 YP_008019777.1 hypothetical protein NC_007793.3914279.p0 Protein 2e-40 43
HMPREF0409_02293 YP_008019777.1 hypothetical protein NC_003923.1003749.p0 Protein 1e-40 43
HMPREF0409_02293 YP_008019777.1 hypothetical protein NC_007622.3794472.p0 Protein 2e-40 43
HMPREF0409_02293 YP_008019777.1 hypothetical protein HE999704.1.gene2815. Protein 2e-36 43
HMPREF0409_02293 YP_008019777.1 hypothetical protein CP000675.2.gene1535. Protein 5e-36 42
HMPREF0409_02293 YP_008019777.1 hypothetical protein AE016830.1.gene1681. Protein 2e-38 42
HMPREF0409_02293 YP_008019777.1 hypothetical protein BAC0288 Protein 3e-36 42
HMPREF0409_02293 YP_008019777.1 hypothetical protein HE999704.1.gene1528. Protein 1e-32 41
HMPREF0409_02293 YP_008019777.1 hypothetical protein CP004022.1.gene3215. Protein 1e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0409_02293 YP_008019777.1 hypothetical protein VFG0596 Protein 4e-43 43
HMPREF0409_02293 YP_008019777.1 hypothetical protein VFG1386 Protein 5e-40 41