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Name : clpB (SCHRY_v1c08330) Accession : YP_008018172.1 Strain : Spiroplasma chrysopicola DF-1 Genome accession: NC_021280 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease, ATPase subunit ClpB Function : - COG functional category : - COG ID : - EC number : - Position : 912833 - 914974 bp Length : 2142 bp Strand : - Note : - DNA sequence : ATGGAATTTCAACAACAGTATGAACCAGGCAAAGATCCAAAAATTCTTGAAAAATTTACCAAAAACTTAAATAAAGAGGC AAGTATTGGTAAATTAGAACCAATTATTGGCCGTGATGATGAAATCAATCGTGTTATTCGAATTTTATCACGGAAAACTA AAAATAATCCCGTTTTAATTGGGGAACCAGGGGTTGGGAAAACAGCCATCGTTGAAGGCTTAGCCCAACGTATTATTAAA GGAGATGTTCCAAGTAATTTAAAAAATAAAGTAATTTATGAATTAGATATGGGAGCTTTAATTGCTGGGGCTAAATTCCA AGGGGAATTTGAAGAACGATTAAAAGCTATTATGAATAAAGTTAAAGAATCAAATGGAGAAATTATCTTATTTATTGATG AGCTACACTTAATTGTTGGAGCAGGTAAAACGCAAGGAAGCATGGACGCTGGAAACTTATTAAAACCAATGTTGGCCCGT GGTGAACTACACTGTATCGGGGCCACAACTTTAGATGAACATCGCTTATACATTGAAAAAGATGCGGCGTTAGAACGAAG ATTTCAAAAAGTAATGGTTAATGAACCAACCATTGAAGAAAGTATATCAATTTTGCGGGGATTAAAAGAGCGTTTTGAAA CTTATCATGGGGTTAAGATCCATGATAATGCTTTAGTTGCGGCGGTTAACTTATCTTCACGTTATATTAGTGATCGTTTT TTACCTGATAAAGCAATTGATTTAGTTGATGAAGCATCAGCGACAATTAAAACGGAAATTGCCTCAGTTCCAACAGAATT AGATACATTAAATCGTAAAATTATTCAGTTAGAAATTGAAAAAGCAGCGTTGCAAAAAGAAGCTGATCAAATTTCAAAAG GTCGTTTAGCTGATATTGAAACAGAATTAGCGCCATTAAAAGTAAAACAAGAAAAACTAGAAGCGCAATGAAATAGTGAA AAAAATGCCATCAAAAATCTAAAAGAAGTTAAATCACAAGTTGAAAAATTAAAAAAAGAACTAGATTTAGCCCAGTTAAC AGGGGACTTTAATCGTGCTGGGGAAATTAAATATTCATTATTACCAGCATTAGAAGAAAAATTACACCAAGAAGAACAGA TGGCTTCGGAATCACATTTATTAAAAGAAGATGTGACAGAACGTGATATCGCTAAAATTGTTGGCAAATGAACAGGGATT CCTGTTGATCGCTTAGTTGAAAAAGAAAAAAGTAAATTATTAAATTTAAATAAAATTTTACGAAAAAGAGTCCGTGGTCA AAATGAAGCAATTGAAGCTGTTGCTGATGCAATCTTAAGAAGCCGTAGTGGCATTAAAGACCCTGACAAACCAATTGGAA GTTTTCTTTTTTTAGGACCAACTGGAGTTGGTAAAACAGAAATTGCTCGTAGTTTGGCATATGTCTTATTTAATTCAGAA AAACAAATGGTGCGACTAGATATGTCAGAATATATGGAAAAACATGCCGTAAGCCGCTTAATTGGAGCACCTCCGGGCTA TGTTGGTTATGAACAAGGAGGACAATTAACAGAAGCCGTTCGTCGTAACCCATATTCAATTGTGTTATTTGATGAAATTG AAAAAGCTAATCCTGAAGTATTAAACATTTTATTACAAATTTTAGATGATGGTCGTATTACTGATGGCCTTGGTAAAACC GTTGACTTTAAAAATACAATCATTATTATGACTTCAAATATTGGATCAGAATATTTATTAAATGAAAACAATGAAGGGGT TGGGGTGAAAATTCAAAAAGAATTAGCAAAACATTTCAAACCAGAGTTTTTAAACCGTATTGATAATGTTATTGTCTTTA GTGCTTTATCAAAAGAAATTATTAAAGAGATTGTTGAAAAAGAATTAGGGGAATTAACACAACGAATTGAAACAAATAAA AATATTCGATTAGTATTTTCCGAAGCTGTTTTAGAAAAGATCATTACTGAAGGTTATGATCGGGAATTTGGGGCTCGACC AATCAAACGTTATATTCAACGCAACATTGAAACGCTAATTGCTCGCGCAATTATTACCGAAGAAATTAAAGAAGATAATT CATACACAATTGATGTTGATAATAAAGAATTAGTAATAAAAACCAGCACAAAATTAAATTAG Protein sequence : MEFQQQYEPGKDPKILEKFTKNLNKEASIGKLEPIIGRDDEINRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIIK GDVPSNLKNKVIYELDMGALIAGAKFQGEFEERLKAIMNKVKESNGEIILFIDELHLIVGAGKTQGSMDAGNLLKPMLAR GELHCIGATTLDEHRLYIEKDAALERRFQKVMVNEPTIEESISILRGLKERFETYHGVKIHDNALVAAVNLSSRYISDRF LPDKAIDLVDEASATIKTEIASVPTELDTLNRKIIQLEIEKAALQKEADQISKGRLADIETELAPLKVKQEKLEAQWNSE KNAIKNLKEVKSQVEKLKKELDLAQLTGDFNRAGEIKYSLLPALEEKLHQEEQMASESHLLKEDVTERDIAKIVGKWTGI PVDRLVEKEKSKLLNLNKILRKRVRGQNEAIEAVADAILRSRSGIKDPDKPIGSFLFLGPTGVGKTEIARSLAYVLFNSE KQMVRLDMSEYMEKHAVSRLIGAPPGYVGYEQGGQLTEAVRRNPYSIVLFDEIEKANPEVLNILLQILDDGRITDGLGKT VDFKNTIIIMTSNIGSEYLLNENNEGVGVKIQKELAKHFKPEFLNRIDNVIVFSALSKEIIKEIVEKELGELTQRIETNK NIRLVFSEAVLEKIITEGYDREFGARPIKRYIQRNIETLIARAIITEEIKEDNSYTIDVDNKELVIKTSTKLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-117 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_008018172.1 | ATP-dependent Clp protease, ATPase subunit ClpB | VFG2076 | Protein | 3e-107 | 42 |
