Gene Information

Name : SCHRY_v1c00180 (SCHRY_v1c00180)
Accession : YP_008017368.1
Strain : Spiroplasma chrysopicola DF-1
Genome accession: NC_021280
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 24922 - 25851 bp
Length : 930 bp
Strand : +
Note : -

DNA sequence :
ATGAACGAAAAGGAAAAAATAGAACAAGAAGTTGGAAAAAAAGTTAAAGTAAAGCAAACGCCAGTTAAAAAAGAAAAAAA
AGAAAAAATTGATTATACAGTTGTTAAGGAATTTAAAAAGAATTTAAAAGAGCAAAAACAACAAACCAAGCAATACTCAA
AAAAAATATTAAAAGGAGAGATTGTTTCGACAACAGGAGCAACCCCAAATACCGATAAATATGTAATTGAATTAGTTAAT
GTTAAAAAAGCTTATATTACAGGGGAAGTTGAAACACCAGTTTTAAAAGGAATTGATTTAAGTTTAGAAAAAGGAGACTT
TATTGTTATTTTAGGGCCTTCAGGGTCAGGGAAGACAACATTGTTGAATGTTATTTCAGGATTAGATAAAGTTAATAGTG
GTGATGTTTTTGTCTTAGGCTACAATTTATCCTTGTTAAAAGATGTTGATTTAACAAAATTCCGAAGAGATCATGTTGGG
TTTATTTTCCAACAATATAATCTTTTAACTAATTTAACAGCAAAAGAAAATGCCGAAGTTGGGGAAAACTTAAGTAAATC
AAAAGAAAAAGATTTAACAATTCAGGACATTTTTAAAACAATTGGAATGGAAGAACAAATGAATAAATATCCTCACCAAA
TGTCAGGGGGTCAACAACAACGGGTTTCAATTGCTCGTGCCTTAGCTAAAAACCCAGATATTTTATTCGGTGATGAACCA
ACAGGGGCCCTAGATGAAGAGATGGGTCGTAAAGTGTTGGAAATTTTAGTAGATGTTAATAAAAAATATAAAACAACTGT
TATAATTGTTACTCATAATCCAAATATTGCTGATATTGCTAATACTGTTATTCATGTTAGAAATGGTTTAATTGATCAAA
TTAAAAGAAATGATAAACCAAAAAGACCAAGCGATATTGATTGATCATAA

Protein sequence :
MNEKEKIEQEVGKKVKVKQTPVKKEKKEKIDYTVVKEFKKNLKEQKQQTKQYSKKILKGEIVSTTGATPNTDKYVIELVN
VKKAYITGEVETPVLKGIDLSLEKGDFIVILGPSGSGKTTLLNVISGLDKVNSGDVFVLGYNLSLLKDVDLTKFRRDHVG
FIFQQYNLLTNLTAKENAEVGENLSKSKEKDLTIQDIFKTIGMEEQMNKYPHQMSGGQQQRVSIARALAKNPDILFGDEP
TGALDEEMGRKVLEILVDVNKKYKTTVIIVTHNPNIADIANTVIHVRNGLIDQIKRNDKPKRPSDIDWS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-37 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-37 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCHRY_v1c00180 YP_008017368.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 3e-42 43
SCHRY_v1c00180 YP_008017368.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-39 43