Gene Information

Name : MASS_1p0077 (MASS_1p0077)
Accession : YP_008017200.1
Strain :
Genome accession: NC_021278
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 93091 - 93777 bp
Length : 687 bp
Strand : -
Note : -

DNA sequence :
GTGACGAGGGTTTTGATCGCCGACGACGATCCGATCGTGCGGGATGTCGTGCGCCGGTATCTGGAGCGCGACGGCCACGA
CGTCAGTACTGCACGCGACGGCCACGAGGCATTGACGCTGCTGGATTCGCAGCACATCGACATGGCGGTGCTGGACGTGA
TGATGCCCGGACCGGACGGGCTGACGCTGTGCCGCAGCATGCGCCGCGGCGACGGGTACGGACTGCCGGTGATCCTGTTG
ACCGCGCTCGGCGAGGAGGACGACCGGATCGCCGGTCTGGAGGCCGGTGCCGATGACTATCTCACCAAACCGTTCAGTCC
GCGTGAACTCGCGCTCCGTGTTCGTTCCGTGCTGCGCCGCACGCCGGCGCGCGCGGTCGTTGAACCGCTGGAGATCACCA
CCGGCGCGCTGCAGATATCGACCGCCGCGCACGCGGTGACCGTCAACGGTGCCGCGGTGAGCCTGACCAACCGCGAATTC
GATCTGATTGTCTTCCTGCTCACCCATCCAGACACCGTCTACTCGCGTGAGCAGCTGCTGAAACTGGTGTGGCAGTGGGA
CTTCGGCGATCTGTCGACAGTGACGGTGCACATCAAACGCCTGCGCGCCAAACTCGGTGACGCACACCGGATTCAGACGG
TGTGGGGTCGCGGCTACATGTGGGGAGGAGATCATGCAGGCGACTGA

Protein sequence :
MTRVLIADDDPIVRDVVRRYLERDGHDVSTARDGHEALTLLDSQHIDMAVLDVMMPGPDGLTLCRSMRRGDGYGLPVILL
TALGEEDDRIAGLEAGADDYLTKPFSPRELALRVRSVLRRTPARAVVEPLEITTGALQISTAAHAVTVNGAAVSLTNREF
DLIVFLLTHPDTVYSREQLLKLVWQWDFGDLSTVTVHIKRLRAKLGDAHRIQTVWGRGYMWGGDHAGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDB402_0209 YP_005126722.1 two-component system response regulator Not tested Not named Protein 9e-29 42
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 1e-31 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 6e-31 41
mprA YP_005684640.1 response regulator mprA Not tested PiCp 3 Protein 1e-29 41
mprA YP_005680459.1 response regulator mprA Not tested PiCp 3 Protein 1e-29 41
mprA YP_005682550.1 response regulator mprA Not tested PiCp 3 Protein 1e-29 41
tcsR1 YP_003782583.1 two-component system transcriptional regulatory protein Not tested PiCp 3 Protein 1e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MASS_1p0077 YP_008017200.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859905.p0 Protein 2e-36 42
MASS_1p0077 YP_008017200.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009641.5332272.p0 Protein 2e-36 42
MASS_1p0077 YP_008017200.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614421.p0 Protein 2e-36 42
MASS_1p0077 YP_008017200.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914279.p0 Protein 2e-36 42
MASS_1p0077 YP_008017200.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794472.p0 Protein 2e-36 42
MASS_1p0077 YP_008017200.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002745.1124361.p0 Protein 2e-36 42
MASS_1p0077 YP_008017200.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009782.5559369.p0 Protein 2e-36 42
MASS_1p0077 YP_008017200.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3237708.p0 Protein 2e-36 42
MASS_1p0077 YP_008017200.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003749.p0 Protein 2e-36 42
MASS_1p0077 YP_008017200.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121668.p0 Protein 2e-36 42
MASS_1p0077 YP_008017200.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain FJ349556.1.orf0.gene Protein 9e-36 41
MASS_1p0077 YP_008017200.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_008702.1.4607594. Protein 3e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MASS_1p0077 YP_008017200.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1389 Protein 3e-30 45
MASS_1p0077 YP_008017200.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1563 Protein 6e-32 41
MASS_1p0077 YP_008017200.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1702 Protein 2e-31 41