Gene Information

Name : AORI_7959 (AORI_7959)
Accession : YP_008016943.1
Strain : Amycolatopsis orientalis HCCB10007
Genome accession: NC_021252
Putative virulence/resistance : Virulence
Product : iron complex transport system permease protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 8768468 - 8769451 bp
Length : 984 bp
Strand : -
Note : -

DNA sequence : 
GTGCGAACGCTGGTCCTCATGGGGTCCCTGGCAGCGCTCGTCGCGGTCATCCTCCTGTCGATCGGCTTCGGCTCGAACCT
CCTCTCGCTCGGCGAAGTCCTGCACGCCCTCTTCGCCTACGACGGGAGCTACAACGACGTCGTCGTCCGCGACGACCGCC
TGCCCCGCACGGTGCTCGGTGTCCTGGTCGGGATGGCGCTCGCGCTGGCGGGCTCGCTCATGCAGGCGATCACCCGGAAC
CCGGTCGCGGAACCCGGCCTGCTCGGCATCAACCACGGCGCCGCCGTCGCGATCGTGCTCGGCTCGACGCTGTTCTCGGT
GACTTCGCCGGGCGAGTACGTCTGGTTCGCCTTCGCCGGGGCGCTCGCGGGCACCGCGCTGGTCTCGGTGATCGGCGGGA
CACGCGGTGCGACGAGCCCGCTGAGGCTGGTGCTGGCCGGTGTCGCCATCCAGGCGGTGTTCGTCGGGATCAACCAGGGC
ATGCAGCTGGTCAACACGCACAACCTGCAGGCCATGCGGTTCTGGCTGGTCGGTTCGCTGGTGAACCGGAACCTGGATCA
GCTGTCGGTCTTGCTGCCGTTCTTCGTCGCGGGTGTCGTGATCGCGATCGTGCTGGCCCGCGCGCTGAACGCGCTGGCGC
TGGGCGAGGACACGGCCCGCGGCCTCGGCGCGAATCCGGCGCTCGTCCGCGTCGCCGGGATGGTCGCCGTCGGCCTGCTT
TCGGCGTCGGCGACCGCGGCCTGCGGGCCGATCGCCTTCGTCGGCCTGATGATCCCGCACGTCGTCCGGACGCTGATCGG
CCAGGACGAGCGGTGGGTGATGCTGATTTCGGCGTTGCTCGGGCCGGTGCTGCTGCTCGGCTGCGACGTCCTCGGCCGCC
TGCTCGGCTCGCCGGGCGAGATCCAGGTCGGCGTGATGACCGACGTCGTCGGCGGGATCGCGTTCGTGATCGTGGCCCGG
CGTCTGAAGGCGGTGCGCCGATGA

Protein sequence : 
MRTLVLMGSLAALVAVILLSIGFGSNLLSLGEVLHALFAYDGSYNDVVVRDDRLPRTVLGVLVGMALALAGSLMQAITRN
PVAEPGLLGINHGAAVAIVLGSTLFSVTSPGEYVWFAFAGALAGTALVSVIGGTRGATSPLRLVLAGVAIQAVFVGINQG
MQLVNTHNLQAMRFWLVGSLVNRNLDQLSVLLPFFVAGVVIAIVLARALNALALGEDTARGLGANPALVRVAGMVAVGLL
SASATAACGPIAFVGLMIPHVVRTLIGQDERWVMLISALLGPVLLLGCDVLGRLLGSPGEIQVGVMTDVVGGIAFVIVAR
RLKAVRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 1e-27 45
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 1e-27 45
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 1e-27 45
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 1e-27 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AORI_7959 YP_008016943.1 iron complex transport system permease protein VFG0926 Protein 9e-35 44