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Name : clpB (AORI_7892) Accession : YP_008016876.1 Strain : Amycolatopsis orientalis HCCB10007 Genome accession: NC_021252 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit ClpB Function : - COG functional category : - COG ID : - EC number : - Position : 8705506 - 8708103 bp Length : 2598 bp Strand : - Note : - DNA sequence : ATGGACGCTTTCAACCCGACCACGAAGACCCAGCAGGCGATCTCGTCGGCGGCGCAGGCGGCCACGATGGCGGGGAACCC GCACGTGGCGGCCGCGCACCTGCTCGGCGCCCTGCTGGCGCAGGGTGAGGGGCTCACCGCACCGCTGCTGACCGCGGTCG GGGCCGATCCGGCGCAGGTGCACAAGGAGCTGGAGCCGCTGATCGCGGCGTTGCCGTCGGCGACCGGCGCCACCGTGTCG AGCCCGCAGTTCGACACGAACGCCGTCAAGGCGCTGACGCACGCGCAGAAGCTCGCGACCGAGCTCGGCGACGAGTACGT CTCGACGGAGCACCTCCTCGTCGGCCTCGCCACCGAAGGCGGGCCGGTGGCCGAGCTGCTCAAGCGGCACGGCGCCACCC CGGACGCGCTGCGCGACGCGTTCGCCAAGGTGCGCGGCTCCGCGCGGATCACCAGCGCGGATCCCGAAAGCACGTTCAAA GCGCTGGAGAAGTACGGCGTCGACCTGACCGAGCGCGCCCGCGCCGGCGAGCTGGACCCGGTGATCGGCCGCGACACCGA GATCCGCCGCGTGGTGCAGGTGCTCTCGCGCCGCACCAAGAACAACCCGGTGCTGATCGGCGAGCCGGGCGTCGGCAAGA CGGCCATCGTCGAAGGGCTCGCCCAGCGCATCGTCGCCGGTGACGTGCCGGAGTCGCTGCGCGGCAAGCGCGTGGTGGCG CTGGACCTCGGCTCGATGGTCGCGGGCGCCAAGTTCCGCGGCGAGTTCGAAGAGCGGCTGAAGGCCGTGCTCAAGGAGAT CACCGACTCCGCGGGCGAGGTCGTCACCTTCATCGACGAGCTGCACACCATCGTCGGCGCCGGCGCGACCGGTGAGGGCG CGATGGACGCGGGCAACATGATCAAGCCGATGCTCGCCCGCGGCGAGCTGCGGATGGTCGGCGCGACCACGCTCGACGAG TACCGCGAGCACATCGAGAAGGACGCCGCGCTGGAGCGGCGCTTCCAGCAGGTGCTGGTCGGCGAACCGTCCCCCGAGGA CACCATCGCCATCCTGCGCGGGCTCAAGGAACGGTACGAGGTGCACCACGGTGTGCGCATCACCGACGCCGCGCTGGTCG CCGCCGCGACGCTGTCCGACCGCTACATCACCGCCCGGTTCCTGCCGGACAAGGCGATCGACCTGGTCGACGAGGCCGCC TCGAAGCTCCGCATGGAGATCGACTCGCGGCCCGTCGAGATCGACGAGGTCGAGCGCGCCGTGCGGCGGATGGAGATCGA AGAGATGGCATTGTCCAAAGAGGACGATGCCGCGTCCAAGGAGCGCCTCGCCGCGCTGCGCTCGGAACTGGCCGAAAAGC GGGAAACGCTGACGGCGCTGACCGCGCGCTGGCAGAACGAGAAGGGCTCGATCGAGCGCGTCCGCGAACTCAAGGAGCAG CTGGAGCAGCTGCGCGGCGAGTCCGAACGCGCCGAACGCGACGGCGACCTCGGCAAGGCCGCCGAACTCCGCTACGGCCG GATTCCCGCGCTGGAGAAGGAGTTCCAGGCCGCGACCGAGGCGAACGAGGTCAGCCAGCAGAACGTCATGCTCAAGGAGG AGGTCAGCGCGGACGACGTCGCCGACGTGGTCAGCGCGTGGACCGGTATCCCGGCCGGGCGGCTGCTGGAAGGTGAGACG GGCAAGCTGCTCCGGATGGAGGAGGAGCTCGGCAAGCGGGTCGTCGGGCAGAAGGAGGCCGTGCAGGTCGTCTCGGACGC GGTGCGCCGCACCCGGGCGGGCGTCGCCGACCCCGACCGGCCGACCGGTTCGTTCCTGTTCCTCGGCCCGACCGGTGTCG GCAAGACCGAGCTGGCGAAGGCGCTGGCCGAGTTCCTGTTCGACGACGAGCGCGCGATGCTGCGGATCGACATGAGCGAG TACGCCGAGAAGCACTCGGTGGCGCGCCTGGTCGGGGCGCCTCCGGGCTACGTCGGCTACGACCAGGGCGGGCAGCTGAC CGAGTCGGTGCGCAGGCGGCCGTATTCGGTGGTGCTGCTCGACGAGGTCGAGAAGGCGCACCCGGACGTGTTCGACGTGC TTCTCCAGGTGCTCGACGACGGACGGCTCACCGACGGCCAGGGCCGCACGGTCGACTTCCGCAACACGATCCTGGTGCTG ACGTCGAACCTCGGCTCGCAGGCCATCGCCGACCCGGCGCTCGACGAGCGTCAGCGCAACGACGCGGTGATGTCGGTGGT GCAGCGGCAGTTCAAACCGGAGTTCCTGAACCGGTTGGACGACATCGTGGTCTTCCACGCGCTGGGCACCGACGAGCTGA CGTCCATTGTGGACATCCAGATCGAGCGGCTCGCCACGCGGCTTTCGCGGCGCCGCCTGACGCTGGAGGTCACCGACGGG GCACGCGAGTGGCTCGCGCTGAACGGCTTCGACCCGATCTACGGCGCGCGGCCGCTGCGGCGGCTCGTGCAGTCGGCGAT CGGCGACAAGCTGGCGAAGCAGCTGCTGGCCGGTGAGATCCGGGACGGCGACACGGTCCGGGTGGACATCCCGGCCCAGG AGGCGTCGGAAGCCCTGACGGTCACGCGGGTGGACTGA Protein sequence : MDAFNPTTKTQQAISSAAQAATMAGNPHVAAAHLLGALLAQGEGLTAPLLTAVGADPAQVHKELEPLIAALPSATGATVS SPQFDTNAVKALTHAQKLATELGDEYVSTEHLLVGLATEGGPVAELLKRHGATPDALRDAFAKVRGSARITSADPESTFK ALEKYGVDLTERARAGELDPVIGRDTEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRGKRVVA LDLGSMVAGAKFRGEFEERLKAVLKEITDSAGEVVTFIDELHTIVGAGATGEGAMDAGNMIKPMLARGELRMVGATTLDE YREHIEKDAALERRFQQVLVGEPSPEDTIAILRGLKERYEVHHGVRITDAALVAAATLSDRYITARFLPDKAIDLVDEAA SKLRMEIDSRPVEIDEVERAVRRMEIEEMALSKEDDAASKERLAALRSELAEKRETLTALTARWQNEKGSIERVRELKEQ LEQLRGESERAERDGDLGKAAELRYGRIPALEKEFQAATEANEVSQQNVMLKEEVSADDVADVVSAWTGIPAGRLLEGET GKLLRMEEELGKRVVGQKEAVQVVSDAVRRTRAGVADPDRPTGSFLFLGPTGVGKTELAKALAEFLFDDERAMLRIDMSE YAEKHSVARLVGAPPGYVGYDQGGQLTESVRRRPYSVVLLDEVEKAHPDVFDVLLQVLDDGRLTDGQGRTVDFRNTILVL TSNLGSQAIADPALDERQRNDAVMSVVQRQFKPEFLNRLDDIVVFHALGTDELTSIVDIQIERLATRLSRRRLTLEVTDG AREWLALNGFDPIYGARPLRRLVQSAIGDKLAKQLLAGEIRDGDTVRVDIPAQEASEALTVTRVD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 3e-100 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_008016876.1 | ATP-dependent Clp protease ATP-binding subunit ClpB | VFG2076 | Protein | 4e-108 | 44 |
| clpB | YP_008016876.1 | ATP-dependent Clp protease ATP-binding subunit ClpB | VFG2084 | Protein | 6e-106 | 43 |
