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Name : clpC (AORI_7497) Accession : YP_008016482.1 Strain : Amycolatopsis orientalis HCCB10007 Genome accession: NC_021252 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit ClpC Function : - COG functional category : - COG ID : - EC number : - Position : 8307094 - 8309652 bp Length : 2559 bp Strand : - Note : - DNA sequence : ATGTTTGAGAGGTTCACCGACCGCGCGAGGCGGGTGGTCGTCCTGGCCCAAGAAGAGGCCAGGATGCTCAACCACAACTA CATCGGCACCGAGCACATCCTCCTGGGTCTGATCCACGAGGGTGAAGGTGTCGCCGCCAAGGCGCTGGAATCGCTGGGCA TCGCGCTGGAGGGCGTCCGCCAGCAGGTCGAGGAGATCATCGGCCAGGGGCAGCAGGCCCCGAGCGGGCACATCCCCTTC ACCCCGCGGGCCAAGAAGGTGCTTGAGCTGTCGCTGCGCGAAGCGCTGCAGCTCGGCCACAACTACATCGGCACCGAGCA CATCCTGCTCGGGCTGATCCGCGAGGGTGAAGGCGTCGCCGCACAGGTGCTCGTCAAGCTCGGCGCGGACCTCAACCGGG TGCGTCAGCAGGTCCTGCAGCTGCTGTCGGGCTACCAGGGTGGCAAGGAGTCGACCGAGACCGGCTCCGGACGCGGTGAA GGCACCCCGTCGTCGTCGCTGGTGCTCGACCAGTTCGGCCGCAACCTGACCGTGCAGGCCCGCGAAGGCAAGCTCGACCC GGTCATCGGCCGGGGCAAAGAGATCGAGCGGGTCATGCAGGTGCTGTCGCGGCGCACCAAGAACAACCCGGTCCTCATCG GTGAGCCCGGCGTCGGCAAGACCGCCGTCGTTGAGGGGCTCGCGCAGAACATCGTCAAGGGCGAGGTCCCGGAGACGCTG AAGGACAAGCAGCTCTACACCCTCGACCTCGGCTCCCTGGTCGCCGGTTCCCGGTACCGCGGTGACTTCGAAGAGCGCCT TAAGAAGGTGCTCAAGGAGATCAAGACCCGCGGCGACATCATCCTGTTCATCGACGAGCTGCACACGCTCGTCGGCGCGG GTGCCGCCGAGGGCGCGATCGACGCCGCGTCGATCCTGAAGCCGATGCTGGCCCGTGGCGAGCTGCAGACCATCGGTGCG ACCACGCTCGAGGAGTACCGCAAGTACATCGAGAAGGACGCCGCGCTGGAGCGCCGCTTCCAGCCGATCCAGGTCGGCGA GCCGTCGCTCGAGCACACGATCGAGATCCTGAAGGGTCTGCGTGACCGGTACGAGGCGCACCACCGCGTCTCGATCACCG ACGGCGCGCTGGTGCAGGCGGCCACCCTCGCGGACCGCTACATCAACGACCGCTTCCTGCCGGACAAGGCGATCGACCTG ATCGACGAGGCCGGCGCCCGGATGCGCATCCGCCGCATGACCGCGCCGCCGGACCTGCGCGAGTTCGACGAGAAGATCGC CGACGTGCGCAGGGACAAGGAGTCCGCGATAGACGCGCAGGACTTCGAGCGCGCCGCCCGCCTCCGTGACGAGGAGAAGA CCCTCCTCGGCCAGAAGGGCGAGCGGGAGAAGCAGTGGAAGGACGGCGACCTCGACGTCGTCGCCGAGGTCGACGAGGAG CAGATCGCCGAGGTCCTCGCCAACTGGACCGGTATCCCGGTGTTCAAGCTCACCGAGGAGGAGACCACGCGTCTGCTCCG CATGGAGGAGGAGCTGCACAAGCGGATCATCGGCCAGGAGGACGCGGTAAAGGCCGTCTCCCAGGCGATCCGCCGCACCC GTGCCGGCCTGAAGGACCCGAAGCGCCCCTCCGGCTCGTTCATCTTCGCCGGCCCGTCCGGTGTCGGTAAGACCGAGCTG TCCAAGGCGCTCGCGGCGTTCCTGTTCGGCGAGGACGACGCGCTCATCCAGATCGACATGGGCGAGTTCCACGACCGCTA CACCGCTTCGCGGCTCTTCGGTGCCCCTCCGGGCTACGTCGGCTACGAAGAGGGCGGCCAGCTGACCGAAAAGGTGCGGC GCAAGCCGTTCTCGGTGGTGCTGTTCGACGAGATCGAGAAGGCCCACCAGGAGATCTACAACACGCTCCTGCAGGTCCTC GAAGACGGTCGTCTCACCGACGGTCAGGGTCGTACGGTCGACTTCAAGAACACCGTGCTCATCTTCACCTCGAACCTGGG TACCTCGGACATCTCCAAGTCCGTCTCGCTCGGGTTCTCGTCCGGCGGTGACAGCACCAACCGGTACGAGAAGATGAAGC AAAAGGTCAACGAGGAGATGAAGAAGCATTTCCGGCCGGAGTTCCTGAACCGGATCGACGACATCATCGTCTTCCACCAG CTGACCAAGGAACAGATCATCGAGATGGTCGATCTGATGATCGCCCGGGTCGAGACGCAGCTCAAGGCCAAGGACATGGA GCTGGAGCTCACGCCCAAGGCCAAGTCGCTGCTCGCCAAGCGCGGCTTCGACCCGGTGCTGGGCGCGCGGCCGCTGCGTC GCACGATCCAGCGCGAGATCGAGGACCAGCTGTCGGAGAAGATCCTGTTCGGCGAGGTCCAGCCCGGCCAGATCATCCTG GTCGACGTCGAGGGCTGGAACGACGAAGAGGGCGAGAAGGACGACAAGGCGCACTTCGTCTTCCGCGGCGAAGCCCGCCC CTCGTCGGTCCCGGACGCCCCGCCGGTGAGCATCGGTGCCGGCTCGACCGAAGAGAACGGTGAAGCCGAGGGCGAGTGA Protein sequence : MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVRQQVEEIIGQGQQAPSGHIPF TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVLQLLSGYQGGKESTETGSGRGE GTPSSSLVLDQFGRNLTVQAREGKLDPVIGRGKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQNIVKGEVPETL KDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEIKTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGA TTLEEYRKYIEKDAALERRFQPIQVGEPSLEHTIEILKGLRDRYEAHHRVSITDGALVQAATLADRYINDRFLPDKAIDL IDEAGARMRIRRMTAPPDLREFDEKIADVRRDKESAIDAQDFERAARLRDEEKTLLGQKGEREKQWKDGDLDVVAEVDEE QIAEVLANWTGIPVFKLTEEETTRLLRMEEELHKRIIGQEDAVKAVSQAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTEL SKALAAFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNTLLQVL EDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKSVSLGFSSGGDSTNRYEKMKQKVNEEMKKHFRPEFLNRIDDIIVFHQ LTKEQIIEMVDLMIARVETQLKAKDMELELTPKAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGEVQPGQIIL VDVEGWNDEEGEKDDKAHFVFRGEARPSSVPDAPPVSIGAGSTEENGEAEGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 78 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 5e-92 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_008016482.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0079 | Protein | 0.0 | 60 |
| clpC | YP_008016482.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0080 | Protein | 7e-143 | 50 |
