Gene Information

Name : AORI_6052 (AORI_6052)
Accession : YP_008015038.1
Strain : Amycolatopsis orientalis HCCB10007
Genome accession: NC_021252
Putative virulence/resistance : Virulence
Product : iron complex transport system ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6823122 - 6823949 bp
Length : 828 bp
Strand : +
Note : -

DNA sequence : 
GTGGAGACCGTGGAAACCCTCACCGAGCAGAGCACGACGTCCCGTCTGCACGCGGACGCGCTGACGCTCGCCTACGACGG
CCGGACCGTGGCCGAAGACCTCGGGGTGGTCATCCCCGACCGGTCGTTCACCGTCATCGTCGGGCCGAACGCCTGCGGGA
AGACGACCCTGCTGCGCGCGCTGGCGCGGATGCTCAAACCGCGCAAGGGTTCGGTGTTCCTCGACGGTCAGGTGATCAGC
TCCTTCCCCGCCAAGGAGGTCGCCCGGCGGCTCGGCCTGCTGCCGCAGAGCTCGATCGCGCCCGACGGCATCACCGTCGC
CGACCTCGTCGCGCGCGGCCGGTACCCGCATCAGCGCCTGCTGCGCCAGTGGTCCCGTGAGGACGCCACCGTGGTCGCGG
AGTCCATGCGCGCCACCGGCGTCGACGACCTCGCCGAGCGGCTGGTCGACGAGCTGTCGGGTGGTCAGCGTCAGCGCGTG
TGGATGGCGATGGCCCTCGCGCAGGAGACCGATCTCCTGCTGCTCGACGAGCCGACGACCTATCTGGACATCGCACACCA
GATGGACATCCTCGATCTGTGCGCGGAACTGCACCAGCAGCAGGGCCGGACGCTGGTCGCGGTGCTGCACGACCTCAACC
ACGCCGCCCGCTACGCGACGCACATGATCGCGATGCGCGGCGGAGAGGTCCTCGCGACCGGCGCGCCCGAAGAGGTCGTG
ACCGCCGCCAACGTCGAAAAGATCTTCGAGCTGCCCTGCCGGGTCATGCCGTGCCCGGAGACCGGCACCCCGCTGGTGAT
CCCGAAAGCCGGACGCCGCGCCGCCTGA

Protein sequence : 
METVETLTEQSTTSRLHADALTLAYDGRTVAEDLGVVIPDRSFTVIVGPNACGKTTLLRALARMLKPRKGSVFLDGQVIS
SFPAKEVARRLGLLPQSSIAPDGITVADLVARGRYPHQRLLRQWSREDATVVAESMRATGVDDLAERLVDELSGGQRQRV
WMAMALAQETDLLLLDEPTTYLDIAHQMDILDLCAELHQQQGRTLVAVLHDLNHAARYATHMIAMRGGEVLATGAPEEVV
TAANVEKIFELPCRVMPCPETGTPLVIPKAGRRAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-58 50
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-58 50
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-58 50
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-58 50
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-58 50
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-44 45
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 4e-53 44
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 4e-53 44
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-42 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-42 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-42 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-42 41
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-42 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AORI_6052 YP_008015038.1 iron complex transport system ATP-binding protein BAC0164 Protein 1e-44 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AORI_6052 YP_008015038.1 iron complex transport system ATP-binding protein VFG0925 Protein 1e-68 57
AORI_6052 YP_008015038.1 iron complex transport system ATP-binding protein VFG1042 Protein 1e-44 45