|
Name : AORI_4945 (AORI_4945) Accession : YP_008013932.1 Strain : Amycolatopsis orientalis HCCB10007 Genome accession: NC_021252 Putative virulence/resistance : Unknown Product : putative drug exporter of the RND superfamily Function : - COG functional category : - COG ID : - EC number : - Position : 5486989 - 5489685 bp Length : 2697 bp Strand : - Note : - DNA sequence : GTGTCGTCATTCCTCTACCGCCTCGGCAGGCTGGCCGCCCGCGGACGCGTACTGGTCACCGCGTTGTGGCTGGTCGTGCT GTGTGTCTCCGGCGGCGCGGCGCTGCTGTTCGGCCAGGGCACCGACGACACGTTCGCGATCCCCGGCTCGGAGTCGCAGG AGGCGCTCGATCACCTCGGGCGCGTCTTCCCGCAGGTGAGCGGGACTTCGGCGCAGTTGGTGGTGCTCGTCCCGGAAGGA CAGCGAGCCGATTCCGCGGCTGTGCGCGACTCCGTCTCCGCCGTGGTCCCGGAGCTGACCGGTGCCCCGCAGGTCTCGAC GGTGGTCAACCCCTTCGATCCGGCCGTGCACGACGCGGTGTCCAAGGACGGCCGCGCCGCGTTGGTCACCGTGCAGCTCG ACGTCGGGCTGGCCGACATCCAGCCGTCGACCCGGACCGTGCTCGCCGGGATCGCGCAGGATCTGGAGCACCGGATCGGC CACGGCACCGAGGTGCTCACCGGCGGCGACGCGTTCTCGGACAAGGTGCCGAAGCTCAGCCCCACCGAGGGGATCGGCCT CGTCATCGCGCTCGTGGTGCTGCTGATGGTGTTCGGTTCGTTCATTGCGGCGGGAATGCCTTTGCTGACGGCGATCCTCG GCGTCGGCGTCTCGGTGGCGCTGGTCTACGCGGCTACGTCGGTGGCCACGGTCTCCTCCACGGCGCCGATGCTCGCGGTC ATGCTCGGGCTCGCCGTCGGCATCGACTACGCGCTCTTCCTCCTTTCCCGCCACCGGGATCAGCTCGCCGAAGGACTGGG CGTCGAGGAGTCCATCGCCAGGGCGACCGCCACCGCCGGATCCGCGGTCATCTTCGCCGGGCTCACCGTGGTGATCGCCC TGCTGGGCCTGTTCGTCGCCGGGATCCCGTTCCTGACGACGATGGGTATCGCGGCGGCGGGCGGTGTCGCGGTCGCGGTG ATCGTGGCCATCACCCTCATTCCCGCGCTGCTGGCGTTCGCCGGCGAGTGGCTGCGGCCCAAGAAGCCGCGGAAGGCACG GAAGACCAAGAAGAAGACGCGGTTCAGCCTCCGCTGGGTCCGGCTCGCCACGAAGTCGCCGTGGGTCACGATCGGACTGA TCGTCGGGGTGCTCGCGATCGCGTCGGTGCCTGCGCTCGATCTCCGGCTCGCCTTGCCGGACAACGGAACCGACGAGGAC GGCACCCCGGCCAGGGTCGCCTACGACGCCGTGGCCGAGCATTTCGGACCCGGCTTCAACGGACCGCTGGTCGTCACCGC GGACATCCTGTCGACCACCGACCCGGTCGGGATCACGAACGGCATCGCCGACGACATCCGCAAGGTGCCCGGCGTCGCCG TCGTCCCGCTCGCGACGCCGAACCCCAAGGGCGACACCGCGATCATCCAGGTCGTGCCGACGACCGGCGCCTACGACGAG GCGACCGACGACCTGGTGGAACGGCTGCGCTCGATGGAAGGGCAGTTCAAGGACCGGTACGGCGTGCAGACCGCGGTCAC CGGCTTCACCGCCGTCGGCATCGACGTGTCCACGCAACTCGGCGACGCGCTGCTGCCGTTCGGCATCCTGGTCGTCGGGC TCTCGCTCGTGTTGCTGGCGATGGTGTTCCGCTCGATCCTCGTGCCGCTGAAAGCCACCTTCGGCTACCTGCTGTCGATC GGTGCGGCGTTCGGCGCGACGTCGTTCGTGTTCGGGCAGGGACATCTGGCGGAGGCGCTGGGCGTCACCCGCACCGGCAG CGTGATCAGCTTCCTGCCGATCATCCTGATGGGTGTCCTTTTCGGACTCGCCATGGACTACGAGGTGTTCCTCGTGTCCC GGATCCGGGAGGACTACGTCCATCACGGCGACGCGCACAAGGCGATCGAGACGGGCTTCGTGTCCGCGTCGAGGGTCGTG ACCGCGGCGGCGGTGATCATGCTGGGCGTGTTCGCCGCCTTCGTGCCCGACGGCAGCGCCACGATCAAACCGATCGCGTT CAGCCTCGCGGTCGGGGTGTTCGTGGACGCCTTCCTGGTACGGATGACGCTCGTCCCCGCCATCCTCGCGCTGCTGGGCC CGCGCGCCTGGGGCCTGCCGCCGTGGCTGGACCGCAAGCTCCCGGTGTTCGACGCCGAGGGCGACGGTCTCGTCCACGAA CTCCGGCTCGCCGACTGGCCCGCGCCCGGTTCGCCCGAAGTGATCAGTGCCGCCGGTCTCCGGGTCGACGACGACCGGGG CCGCACGATCTTCCGCGACGTCGAACTGCATCTCGGCCCGGGCGAGATCCTCGCCGTGCACGGTTCCGGCCCGGCGGGCA AGAGCGCGTTGCTCTACGCGCTGGCCGGCCGGGTGCCGAACGTCCGCGGGGACCTGAAGGTCCTCGGCCGGGTGCTGCCG CAGCACGCGCACGCCGTCCGGCGGAACGTCGCCTTCGTCGCCTGCAAGGAGACCGACGATCCCGCCGGCGAGGTCCGCCG CGCACTCGACGACGGCGTCGCGCTCGTCTTCCTCGACGACCTGGACACCGTCGTCGCCACCGCCCAGCGCGCGGGCCTGC GAGCCGCGTTCGCGAGCCGGGCCGCGACGTTCGCTGTGTCCTGCCAAAGCCTCGCCATCGTGCGGGATCTGTTGCCCACC ACCGCCGTCGCGGGTCTCGCCATGACGCCCGCCCCCGTCCCAGCCGAGGTCCGCTGA Protein sequence : MSSFLYRLGRLAARGRVLVTALWLVVLCVSGGAALLFGQGTDDTFAIPGSESQEALDHLGRVFPQVSGTSAQLVVLVPEG QRADSAAVRDSVSAVVPELTGAPQVSTVVNPFDPAVHDAVSKDGRAALVTVQLDVGLADIQPSTRTVLAGIAQDLEHRIG HGTEVLTGGDAFSDKVPKLSPTEGIGLVIALVVLLMVFGSFIAAGMPLLTAILGVGVSVALVYAATSVATVSSTAPMLAV MLGLAVGIDYALFLLSRHRDQLAEGLGVEESIARATATAGSAVIFAGLTVVIALLGLFVAGIPFLTTMGIAAAGGVAVAV IVAITLIPALLAFAGEWLRPKKPRKARKTKKKTRFSLRWVRLATKSPWVTIGLIVGVLAIASVPALDLRLALPDNGTDED GTPARVAYDAVAEHFGPGFNGPLVVTADILSTTDPVGITNGIADDIRKVPGVAVVPLATPNPKGDTAIIQVVPTTGAYDE ATDDLVERLRSMEGQFKDRYGVQTAVTGFTAVGIDVSTQLGDALLPFGILVVGLSLVLLAMVFRSILVPLKATFGYLLSI GAAFGATSFVFGQGHLAEALGVTRTGSVISFLPIILMGVLFGLAMDYEVFLVSRIREDYVHHGDAHKAIETGFVSASRVV TAAAVIMLGVFAAFVPDGSATIKPIAFSLAVGVFVDAFLVRMTLVPAILALLGPRAWGLPPWLDRKLPVFDAEGDGLVHE LRLADWPAPGSPEVISAAGLRVDDDRGRTIFRDVELHLGPGEILAVHGSGPAGKSALLYALAGRVPNVRGDLKVLGRVLP QHAHAVRRNVAFVACKETDDPAGEVRRALDDGVALVFLDDLDTVVATAQRAGLRAAFASRAATFAVSCQSLAIVRDLLPT TAVAGLAMTPAPVPAEVR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CMM_0093 | YP_001220832.1 | RND family transporter | Not tested | chp/tomA region | Protein | 5e-72 | 41 |
