Gene Information

Name : AORI_3546 (AORI_3546)
Accession : YP_008012534.1
Strain : Amycolatopsis orientalis HCCB10007
Genome accession: NC_021252
Putative virulence/resistance : Virulence
Product : iron complex transport system ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3880578 - 3881354 bp
Length : 777 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTGCCCGCTTGACCGCTCGGGACCTGACCCTGCGCTACGGCGACCGGGTCGTGTCGACCCGGCTGAGCCTCGACGT
GCCCGACCGTGCGTTCACCGCCGTCGTCGGACCGAACGCGTGTGGCAAGTCCACCCTGCTGCGCGCGTTCGTCCGGCTGC
TGCGCCCGTCGGACGGCGAGGTCCTGCTCGACGGCAAGGACGTGGGTTCCTTTCCCGGCAAGGGTCTGGCGCGGGAGCTC
GGGTTCCTGCCGCAGGATCCGGTCGCCCCGGAGGACGTCCGCGTCCGGCAGCTGATCGCGCGCGGCCGGTTCCCGCATCA
GTCGTTGTTCGCCACCTGGTCCGAAGAGGACGAACGCGCCGTGCTCGACGCGATGACCGCGGCCGGGGTGGCGGGGCTGG
CCGACCGGCCGGTGCAGGAGCTTTCGGGCGGGCAGCGGCAGCGCGTGTGGGTGGCGCTGGTGCTGGCGCAGAAGACGCCG
TACCTGCTGCTCGACGAACCGACGTCCTTTTTGGACATCGCGCACCAGTACCAGTTGCTGGGTCTGCTGGCGCGCCTGCG
TGACGAGGGCCGCACGGTGATCGCCGTCCTGCACGACATCAACCAGGCCTGCCGGTACGCCGATCACCTCGTCGCCCTGC
GGGACGGCCGGATCGTCGCCGAGGGCGCGCCGTCCGACATCGTCGACGCGGAGCTGATGAAGGAGGTCTTCGATCTCCCC
AGTGTCGTCGTGCCCGACCCGGTGACCGGAACCCCGATGGTGGTGCCTTCATGCTGA

Protein sequence : 
MSARLTARDLTLRYGDRVVSTRLSLDVPDRAFTAVVGPNACGKSTLLRAFVRLLRPSDGEVLLDGKDVGSFPGKGLAREL
GFLPQDPVAPEDVRVRQLIARGRFPHQSLFATWSEEDERAVLDAMTAAGVAGLADRPVQELSGGQRQRVWVALVLAQKTP
YLLLDEPTSFLDIAHQYQLLGLLARLRDEGRTVIAVLHDINQACRYADHLVALRDGRIVAEGAPSDIVDAELMKEVFDLP
SVVVPDPVTGTPMVVPSC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-62 49
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 3e-63 49
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-63 49
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-63 49
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 3e-63 49
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-52 46
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 5e-59 44
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 5e-59 44
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-52 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AORI_3546 YP_008012534.1 iron complex transport system ATP-binding protein BAC0164 Protein 1e-52 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AORI_3546 YP_008012534.1 iron complex transport system ATP-binding protein VFG0925 Protein 4e-73 55
AORI_3546 YP_008012534.1 iron complex transport system ATP-binding protein VFG1042 Protein 9e-53 46